Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1618 ATGAAGCCTTCCGCTAAACCTGGCTTGGAGGAGTCTCAGGAGCAGATCCATAAGATAAGGATCACTCTTTCCTCTAAGAACGTGAAAAATCTCGAAAAAGTTTGTGCTGACTTGGTTCGAGGCGCCAAGGACAAGAGGCTTAGGGTCAAGGGACCTGTGAGAATGCCCACTAAAGTTCTTCTCATCACTACTAGGAAATCCCCTTGTGGTGAAGGTACCAACACTTGGGACAGATTTGAACTTCGTGTGCACAAGAGAGTTATCGACTTGTACAGCTCCCCAGATGTGGTTAAGCAGATTACTTCAATTACAATTGAACCTGGTGTGGAAGTTGAGGTTACCATTGCAGATGCATGA 357 0.4566 MKPSAKPGLEESQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLLITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1618 118 PRINTS Ribosomal protein S10 family signature 18 31 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju10g1618 118 PRINTS Ribosomal protein S10 family signature 53 68 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju10g1618 118 PRINTS Ribosomal protein S10 family signature 75 89 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju10g1618 118 FunFam 40S ribosomal protein S20 2 117 - -
Alju10g1618 118 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 11 117 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju10g1618 118 Hamap 30S ribosomal protein S10 [rpsJ]. 16 115 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju10g1618 118 SUPERFAMILY Ribosomal protein S10 18 115 IPR036838 -
Alju10g1618 118 Gene3D Ribosomal protein S10 domain 4 117 IPR036838 -
Alju10g1618 118 SMART Ribosomal_S10_2 20 114 IPR027486 -
Alju10g1618 118 Pfam Ribosomal protein S10p/S20e 20 114 IPR027486 -
Alju10g1618 118 NCBIfam 30S ribosomal protein S10 17 115 IPR005729 GO:0003735|GO:0006412|GO:0015935
Alju10g1618 118 ProSitePatterns Ribosomal protein S10 signature. 42 57 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1618 Alju-ChrAlju10 21696830 21698577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1618 1 118 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 91.525 2.54e-74 214