Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1610 ATGAAGACCTTTTCTTCTACTAACCACATTCTGTTTATCTCCATTTTCCTAATTTCCATTTCATCAATATTCTCAATCTCATCTTCTGAGCAAAAACCGTACCAAGATGCCGACACGCAGTTCATCAGAACCTCTTGTGATTCCACAACCTACCCAAGGCTTTGCTTCGCCTCCTTATCCAAGCACGCCGCCTTCATACAAACCGACCGCGTGCTCCTTACGGGCACGGCTTTGAACGTGACTCTGTCGTCGGCGAAGGCGACATCAGCAATGATGTCGGCACTGTCCAAGAGCTACGGTGCCGGTATGAAGCCGAGGGAGGAGGCGGCGATGAGCGACTGCATGGAGGAGCTGAGTGACTCAGTGGATGAGCTCAGGAAGTCCATTGGTGAGATGAGTCAATTCGGAGCCTCAAACTTTGAGCTGGCCATGAATGATGTTCAGACTTGGGTTTCTGCTGCTTTGACTGATGAGAACACTTGCACTGATGGGTTTGAAGAAGTTAATAATAATGGGAATTTGAAGAACACTGTGAGAAGCCGAATTGTTCTTGTGGCTCAGCTTACTAGTAATGCTTTGGCTTTCATAAATCAGCTTGCAGCTTCTTGA 609 0.4745 MKTFSSTNHILFISIFLISISSIFSISSSEQKPYQDADTQFIRTSCDSTTYPRLCFASLSKHAAFIQTDRVLLTGTALNVTLSSAKATSAMMSALSKSYGAGMKPREEAAMSDCMEELSDSVDELRKSIGEMSQFGASNFELAMNDVQTWVSAALTDENTCTDGFEEVNNNGNLKNTVRSRIVLVAQLTSNALAFINQLAAS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1610 202 Pfam Plant invertase/pectin methylesterase inhibitor 41 194 IPR006501 GO:0004857
Alju10g1610 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 201 IPR035513 -
Alju10g1610 202 NCBIfam pectinesterase inhibitor domain 12 199 IPR006501 GO:0004857
Alju10g1610 202 CDD PMEI-like_3 44 201 - -
Alju10g1610 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 199 IPR035513 -
Alju10g1610 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 195 - -
Alju10g1610 202 FunFam Pectinesterase inhibitor 3 37 200 - -
Alju10g1610 202 SMART PMEI_2 37 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1610 Alju-ChrAlju10 21421232 21421840 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1610 10 194 Carbohydrate Esterase AT5G53370 29.787 3.85e-19 82.8