Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1609 ATGAAGGCCTTTTCTTCTACCAACCAAATTCTCTTTATCTCGATTTTCATAATATTCATTTCTTCAATATTCTCAATCTCATCTTCAGAAAAACCCTTCCAAGATGCCAACACACAATTCATCAGAACCTCTTGTGATTCCACAACCTACCCAAGGCTCTGCTTCGCCTCCTTATCGAAGCATGCTAGCTTCATACAAACCGACCACGTGCTTCTTACCGGCACGGCGCTGAACGTGACTCTAGCATCGGTGAAGGCGACGTCGGCGATGATGTCAGCGCTGTTAAAGAGCTACAGAAGCCGGATGAAGCCGAGGGAGAAGGCAGCGATGAGGGACTGCATGGAGGAGCTGAGTGACTCGGTGGACGAACTCAGGAAGTCCATTGGTGAGATGAGTCAACTCGGAGGCTCCTCAAACTTTGAGCTGACCATGAATGATGTTCAGACTTGGGTTTCTTCTGCTTTGACTGATGAGAGCACTTGCACTGATGGGTTTGAAGAAGTTAATAATAATGGAAATTTGAAGAACACTGTGAGAAGCAGAATTGTTCATGTGGCTCAGCTTACTAGTAATGCCTTGGCTTTCATAAATCAGCTTGCAGCTTCTTCACATATTTAA 618 0.4531 MKAFSSTNQILFISIFIIFISSIFSISSSEKPFQDANTQFIRTSCDSTTYPRLCFASLSKHASFIQTDHVLLTGTALNVTLASVKATSAMMSALLKSYRSRMKPREKAAMRDCMEELSDSVDELRKSIGEMSQLGGSSNFELTMNDVQTWVSSALTDESTCTDGFEEVNNNGNLKNTVRSRIVHVAQLTSNALAFINQLAASSHI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1609 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 201 IPR035513 -
Alju10g1609 205 FunFam Pectinesterase inhibitor 3 36 200 - -
Alju10g1609 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 195 - -
Alju10g1609 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 199 IPR035513 -
Alju10g1609 205 Pfam Plant invertase/pectin methylesterase inhibitor 40 194 IPR006501 GO:0004857
Alju10g1609 205 Coils Coil 114 134 - -
Alju10g1609 205 SMART PMEI_2 36 195 IPR006501 GO:0004857
Alju10g1609 205 NCBIfam pectinesterase inhibitor domain 13 199 IPR006501 GO:0004857
Alju10g1609 205 CDD PMEI-like_3 43 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1609 Alju-ChrAlju10 21390394 21391011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1609 20 199 Carbohydrate Esterase AT3G14310 27.222 4.54e-22 91.7