Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1601 ATGAGCCAAAGTCTCCACCGGTTCAGACCGAACCATCAGTCAGAGTTCAAGAAAATGATGGTTCAATTAGCACTAGACCAAGCCCAAGCCATGCATAAAGAAGCTCAAGAGTATGGTCCTAAATATGTCACCAAGATGCAGAAATGTGTATTCAGTGATTGTCTAAGGCTTTACGACAAGACCGTCTTCCTTCTAAACCGAACCCTTCAAGACCTACACACAAATTCTTGCTCTCTATCAGACGCACAAACATGGCTCAGTACTGCCCTCACAAACGTCGAAATTTGCCGGAGCGGCGCTTTGCAGCATAGAGTTGGAGAGTTTACAGCTCAAAATAATGTGAGCGACAACGTTAGAAAGATGATAAGCAATGCGTTGGCTGTTAATGGGAAATTCCTGAAGGAAGAGAATAACACAGAAGAAGAGATCAAAGCTCATGGATTTCCCAGTTGGTTTTCTCGGCACGACAGGAGGTTGTTGAGTTTGAAGCCATCTTCAGTGAAGGCAGATCTCGTGGTGGCTCAAGATGGGACGGGCCATTTCAAGACGGTGCAAGCCGCCATTGATGTAGCATCAAGGAGAAAAGTGAAGAATAGGTTTGTGATAAGAGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGATAAGGATAATGAAAATCTCATGATTATTGGTGATGGAATGAGACTCACCATTATAACTGGTAGTAAGAGTGTCAAAGATGGAATTACTCCCTCTATGTCTGCAACAGCAGGTTAG 762 0.4318 MSQSLHRFRPNHQSEFKKMMVQLALDQAQAMHKEAQEYGPKYVTKMQKCVFSDCLRLYDKTVFLLNRTLQDLHTNSCSLSDAQTWLSTALTNVEICRSGALQHRVGEFTAQNNVSDNVRKMISNALAVNGKFLKEENNTEEEIKAHGFPSWFSRHDRRLLSLKPSSVKADLVVAQDGTGHFKTVQAAIDVASRRKVKNRFVIRVKKGIYEENIEVDKDNENLMIIGDGMRLTIITGSKSVKDGITPSMSATAG 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1601 253 SMART PMEI_2 11 128 IPR006501 GO:0004857
Alju10g1601 253 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 13 132 IPR035513 -
Alju10g1601 253 Pfam Pectinesterase 170 251 IPR000070 GO:0030599|GO:0042545
Alju10g1601 253 Pfam Plant invertase/pectin methylesterase inhibitor 13 127 IPR006501 GO:0004857
Alju10g1601 253 CDD PMEI-like_3 3 134 - -
Alju10g1601 253 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 132 IPR035513 -
Alju10g1601 253 NCBIfam pectinesterase inhibitor domain 14 130 IPR006501 GO:0004857
Alju10g1601 253 SUPERFAMILY Pectin lyase-like 167 251 IPR011050 -
Alju10g1601 253 Gene3D - 164 253 IPR012334 -
Alju10g1601 253 PANTHER PECTINESTERASE 14 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1601 Alju-ChrAlju10 21087597 21088358 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1601 8 253 Carbohydrate Esterase AT5G51500 49.801 1.23e-73 232