Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1595 ATGAGCCACCGTCACCACCGCTTCAGACCGAGCCATTCGTCAGAGTTCAGCAAAATGCTGGTTCAATTAGCACTAGACCAAGCGCAAGCCATGCATAAGGAAGCTCAAGAATATGGCCCTAAATGTGTTTCCAAGATGCAGAAATGTGTATTCAGTGATTGTTTGAAGCTCTACGACAATACCATATTCCATCTCAACCGAACCCTTCAAACCCTACCTACAGCTTCTTGCTCGCTATCAGACGCACAAACATGGCTCAGCACTGCCCTCACAAACATCGAAACTTGCCGGAGCAGTGCGTTGCAGCTCAAAATCGGAGAGTTTACTGCTCAAAGTAATGTGACCAGCAATGTTAGAAAGATGATAAGCAATGTGTTGGCTGTTAATGGGAAATTCCTGAAGCAGGAGAATTTCACAGAAGAAGAGATAAAAGCACACGGGTGTCCAAGTTGGTTTTCTGGGCACGACAGGAGGTTGTTGAGCTCGAGGCGATCATCGGTGAAGGCAAATCTCGTGGTGGCTCAAGATGGTACCGGCCATTTCAAGACGGTGCAAGCCGCCATTGATGTAGCATCAAGGAGAAAAGTGAAGACGAGGTTTGTGATAAGAGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGATAAGGATAATGAAAATCTCATGATTATTGGTGATGGAGCGAGAGTGACCATTATAACGGGTAGTAAGAGTGTCAAAGATGGAATTACCCCGGCTAGCTCCGCAACAGCAGGTCAGTTATATTAA 771 0.4527 MSHRHHRFRPSHSSEFSKMLVQLALDQAQAMHKEAQEYGPKCVSKMQKCVFSDCLKLYDNTIFHLNRTLQTLPTASCSLSDAQTWLSTALTNIETCRSSALQLKIGEFTAQSNVTSNVRKMISNVLAVNGKFLKQENFTEEEIKAHGCPSWFSGHDRRLLSSRRSSVKANLVVAQDGTGHFKTVQAAIDVASRRKVKTRFVIRVKKGIYEENIEVDKDNENLMIIGDGARVTIITGSKSVKDGITPASSATAGQLY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1595 256 Pfam Plant invertase/pectin methylesterase inhibitor 13 127 IPR006501 GO:0004857
Alju10g1595 256 SMART PMEI_2 11 128 IPR006501 GO:0004857
Alju10g1595 256 Pfam Pectinesterase 170 252 IPR000070 GO:0030599|GO:0042545
Alju10g1595 256 NCBIfam pectinesterase inhibitor domain 13 129 IPR006501 GO:0004857
Alju10g1595 256 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 132 IPR035513 -
Alju10g1595 256 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 13 133 IPR035513 -
Alju10g1595 256 PANTHER PECTINESTERASE 15 251 - -
Alju10g1595 256 SUPERFAMILY Pectin lyase-like 166 251 IPR011050 -
Alju10g1595 256 Gene3D - 164 254 IPR012334 -
Alju10g1595 256 CDD PMEI-like_3 4 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1595 Alju-ChrAlju10 20906609 20907379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1595 4 253 Carbohydrate Esterase AT3G47400 49.219 5.83e-76 239