Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1594 ATGGCATCATTCATTGTTAAGCTATTCTTCTCACTCACCTTATTTTCTTCTCTTTTCTCAATATCATCATCATCTACTTCTTCAAGAACATCATCTTCATCTATAGATTTTTGGTGCAACCAAACTCCTCATCCTGAGCTATGCAAATATCACATGAGCAACAATCACCACTGGTTCAGACCAAACCACCGGTCCGAGCTCAAAACAATGCTGGTTCAGTTAGCCATGGAAGAAGCTCAAGTTATGCATAAGGAAGCACAAGAATATGGCCCAAAATTTGTGACCTCAACACAAAAATGTGTGTTCAATGATTGTTTAAAGCTCTACGATAACACCATCTTCCATCTAAACCAAACCCTTCAAACCCTACATACTTCTTCTTGCTCCTTATTAGATGCACAAACATGGCTCAGTACTGCCCTCACAAACATCGAAACCTGCCATAGCAGCGCATCACAGCTCGGAGTCGGAGAATTCACAGCTCAAAATAACGCGAGCGACAAAGTTAGGAAGATGATAAGCAATGTGTTAGCCGTGAACGGTGAGATTATGAAGCAAGAGAATAATAACAGAGAGAGAAAAGCACGTGGGTTTCCAAGTTGGTTTTCTGGGAAGCACAGGAGGTTGTTGAGCTTGAGTTCATATTCTTTGAAGGAAAATATGGTGGTGGCTCAAGATGGTACGGGCCATTTTAAGACCGTGCAAGCTGCCATTGATGAAGCTTCACGGAGAACAGTGAAGACGAGGTTTGTGATACGAGTGAAGAAAGGGATTTATGAAGAAAATATTCAAGTTGATAACAAAAATGAAAATCTCATGATTGTTGGTGATGGAATGAAACTAACGATTATAACTGGTAATAGAAGCGTTGACGATGGAATTACCCCCTCTATGTCTGCAACAGCAGGCATAGATGGCGTTCACTTCATTGCAAGAGATATCACTATTAGAAACACGGCCGGTCCAGAGAAAGATAATAATAAGTGA 987 0.4083 MASFIVKLFFSLTLFSSLFSISSSSTSSRTSSSSIDFWCNQTPHPELCKYHMSNNHHWFRPNHRSELKTMLVQLAMEEAQVMHKEAQEYGPKFVTSTQKCVFNDCLKLYDNTIFHLNQTLQTLHTSSCSLLDAQTWLSTALTNIETCHSSASQLGVGEFTAQNNASDKVRKMISNVLAVNGEIMKQENNNRERKARGFPSWFSGKHRRLLSLSSYSLKENMVVAQDGTGHFKTVQAAIDEASRRTVKTRFVIRVKKGIYEENIQVDNKNENLMIVGDGMKLTIITGNRSVDDGITPSMSATAGIDGVHFIARDITIRNTAGPEKDNNK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1594 328 CDD PMEI-like_3 38 185 - -
Alju10g1594 328 Pfam Plant invertase/pectin methylesterase inhibitor 34 178 IPR006501 GO:0004857
Alju10g1594 328 NCBIfam pectinesterase inhibitor domain 9 181 IPR006501 GO:0004857
Alju10g1594 328 PANTHER PECTINESTERASE 17 325 - -
Alju10g1594 328 Gene3D - 214 327 IPR012334 -
Alju10g1594 328 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 182 IPR035513 -
Alju10g1594 328 Pfam Pectinesterase 220 325 IPR000070 GO:0030599|GO:0042545
Alju10g1594 328 SMART PMEI_2 30 179 IPR006501 GO:0004857
Alju10g1594 328 SUPERFAMILY Pectin lyase-like 218 325 IPR011050 -
Alju10g1594 328 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1594 Alju-ChrAlju10 20861079 20863458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1594 25 324 Carbohydrate Esterase AT5G51500 46.557 6.81e-89 274