Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1591 ATGCTGGTTCAATTAGCTCTGGACCAAGCCCAAGCCATGCATAATAAAGCTCAAGAATATGGCCCTAAATGTGTGACCAATATGCAGAAATGTGTATTCAGTGATTGTTTAAAGCTCTATGACAATAGCATCTTCCATCTAAACCGAACCCTTCATGGCCTACACATATCTTCTTGCTCGCTATCGGACGCACAAACATGGCTCAGTACTGCCCTCACAAACATCGAAACTTGCCGGAGCGTCGCATTGCAGCTCGGAGTCGGAGAGTTCACATCTCAAAATAATGTGAGCGACAACGTTAGAAAGATGATAAGCAATGTGTTAGCTGCCAATGGGAAATTCCTGAAGCAAGAGAATTACACAGAAGAAGATATTAAAGCTCATGGGTTTCCCAGTTGGTTTTCTCGGCACGACAGGAGGTTGTTAAGTTTGAAGCCAACTTCAGTGAAGGCAAATCTTGTGGTGGCTCAAGATGGGGCTGGACATTTTAAGACGGTGCAAGCCGCCATTGATGCAGCTTCAAGGAGAAAAGTGAAGACGAGGTTTGTGGTAAGAGTGAAGAATGGGATTTATGAAGAGAATATTGAAGTTGACACGGATAATGAAAATCTCATGATTATTGGAGATGGAATGAGACTCACCATGATAACTCGCAGTAAAAGTGTCAAAGATGGAATTACCCCTTCTATGTCTGCAACGGCAGATGGTGCTCACTTCATTGCACGAGATATCACTTTTAGAAACACGGCCGGTCCTGAAAAAGGTCAAGCCGTGGCACTCCGATCAGCCTCCGACCTCTCTGTCTTCTACCGGTGCTCCATTGAAGGCTATCAGGACACTCTAATGGCTGATTCACAACGCCAATTCTACTGA 873 0.4467 MLVQLALDQAQAMHNKAQEYGPKCVTNMQKCVFSDCLKLYDNSIFHLNRTLHGLHISSCSLSDAQTWLSTALTNIETCRSVALQLGVGEFTSQNNVSDNVRKMISNVLAANGKFLKQENYTEEDIKAHGFPSWFSRHDRRLLSLKPTSVKANLVVAQDGAGHFKTVQAAIDAASRRKVKTRFVVRVKNGIYEENIEVDTDNENLMIIGDGMRLTMITRSKSVKDGITPSMSATADGAHFIARDITFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMADSQRQFY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1591 290 PANTHER PECTINESTERASE 7 290 - -
Alju10g1591 290 SMART PMEI_2 1 110 IPR006501 GO:0004857
Alju10g1591 290 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 114 IPR035513 -
Alju10g1591 290 Pfam Plant invertase/pectin methylesterase inhibitor 2 109 IPR006501 GO:0004857
Alju10g1591 290 NCBIfam pectinesterase inhibitor domain 3 111 IPR006501 GO:0004857
Alju10g1591 290 CDD PMEI-like_3 1 116 - -
Alju10g1591 290 Gene3D - 146 290 IPR012334 -
Alju10g1591 290 Pfam Pectinesterase 152 290 IPR000070 GO:0030599|GO:0042545
Alju10g1591 290 SUPERFAMILY Pectin lyase-like 149 290 IPR011050 -
Alju10g1591 290 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 114 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1591 Alju-ChrAlju10 20790497 20791467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1591 1 290 Carbohydrate Esterase AT5G51500 54.054 2.36e-103 310