Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1589 ATGGCATCATCAATCATTGTTAAGCTATTCTTTTCCCTCTCTTTATTTTCTTCCCTTTTCTCAATATCATCATCATCATCTTCGTCTATAGATTTTTGGTGTAACCAAACTCCTCACCCAGAGCCATGCAAATACCACATGAGCCATTGTCAAGACCGGTTCAAACCGAACCATCCGTCAGAGTTCAAGAAAATGATGGTTCAATTAGCACTAGACCAAGCCCAAGCCATGCATAAAGAAGCTCAAGAATATGGCCCTAAATATGTCACCAAGATGCAGAAATGTGTATTCAGTGATTGTTTAAAGCTTTACGACAAGACCATCTTCCATCTAAACCGAACCCTTCAAGGCCTACACACAAATTCTTGCTCTCTATCGGACGCACAAACATGGCTCAGTACTGCCCTCACAAACATCGAAACATGCCGGAGCGGTGCGTTGCAGCTTAGAGTTGGAGAGTTTACAGCTCAAAATAATGCGAGCGACAACGTTAGAAAGACGATAAGCAATGCGTTGGCTGTTAATGGGAAATTCGTGAAGGAACAGAATTACACAGAAGAAGAGATCAAAGCTCATGGATTTCCGAGTTGGTTTTCTCGGCACGACAGGAGGTTGTTGAGTTTGAAGCCATCTTCAGTGAAGGCAAATCTTGTGGTGGCTCAAGATGGGACGGGCCATTTCAAGACGGTGCAAGCCGCCATTGATGTAGCATCAAGGAGAAAAGTGAAGAATAGGTTTGTGATAAGAGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGACACGGATAATGAAAATCTCATGATTATTGGAGATGGAATGGGACTTACCGTTATAACTGGCAGTAAAAGTGTCCAAGATGGAATTACTCCTTCCATGTCTGCAACGGCAGGTATAGATGGCGCTCACTTCATTGCACGAGACATCACTTTCAGAAATACGGCTGGTCCTGAAAAAGGTCAAGCCGTGGCACTCCGATCAGCCTCCGATCTCTCTGTCTTCTATCGGTGTTCCATCGAAGGCTATCAAGACACTTTAATGGCTGATTCACAACGCCAATTCTACAGAGACTGTAGAATTTTCGGCACAGTGGATTTCATTTGGGGAAATGCTGCGGTTGTTCTACAAAATTGTAGAATTCTCGTAAGAAAGCCACTTCAAGGACAAGCAAACATGATCACAGCCCAAGGACGAGACGACCCTTTTCAAAACACTGGAATATCGATAATCGATTCTCAGATTCAGGCGGCGCCGGATTTCAGGAGGGTTTATCACTCATTTGAAACATATTTGGGTCGGCCATGGCAGCAATATGCTCGAGTGGTTGTCATGAAAACTTATATGGAAGGCTTGGTAAATCCATTGGGATGGTCTCCATGGGACAATAGTGGTGTTGGCGAAGATACGTGTTACTTTGGGGAATATATGAACTATGGGGCTGGTTCATCAACAAATAGTAGAGTACAATGGCCTGGCTTTCATGTCATAACTAATCCAAATGAGGCAAACCAGTTTAGTGTTGCTAGCTTCCTTACTGGTCGCACATGGTTGCCTAGCACTGGGGTCCCTTTTACTATTGGTGTTAATTAA 1593 0.4344 MASSIIVKLFFSLSLFSSLFSISSSSSSSIDFWCNQTPHPEPCKYHMSHCQDRFKPNHPSEFKKMMVQLALDQAQAMHKEAQEYGPKYVTKMQKCVFSDCLKLYDKTIFHLNRTLQGLHTNSCSLSDAQTWLSTALTNIETCRSGALQLRVGEFTAQNNASDNVRKTISNALAVNGKFVKEQNYTEEEIKAHGFPSWFSRHDRRLLSLKPSSVKANLVVAQDGTGHFKTVQAAIDVASRRKVKNRFVIRVKKGIYEENIEVDTDNENLMIIGDGMGLTVITGSKSVQDGITPSMSATAGIDGAHFIARDITFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMADSQRQFYRDCRIFGTVDFIWGNAAVVLQNCRILVRKPLQGQANMITAQGRDDPFQNTGISIIDSQIQAAPDFRRVYHSFETYLGRPWQQYARVVVMKTYMEGLVNPLGWSPWDNSGVGEDTCYFGEYMNYGAGSSTNSRVQWPGFHVITNPNEANQFSVASFLTGRTWLPSTGVPFTIGVN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1589 530 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 178 IPR035513 -
Alju10g1589 530 SUPERFAMILY Pectin lyase-like 213 528 IPR011050 -
Alju10g1589 530 NCBIfam pectinesterase inhibitor domain 2 176 IPR006501 GO:0004857
Alju10g1589 530 Gene3D - 210 529 IPR012334 -
Alju10g1589 530 PANTHER PECTINESTERASE 16 519 - -
Alju10g1589 530 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 178 IPR035513 -
Alju10g1589 530 CDD PMEI-like_3 33 180 - -
Alju10g1589 530 Pfam Pectinesterase 216 514 IPR000070 GO:0030599|GO:0042545
Alju10g1589 530 FunFam Pectinesterase 210 529 - -
Alju10g1589 530 SMART PMEI_2 25 174 IPR006501 GO:0004857
Alju10g1589 530 Pfam Plant invertase/pectin methylesterase inhibitor 29 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1589 Alju-ChrAlju10 20765564 20767248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1589 21 526 Carbohydrate Esterase AT5G51500 54.883 0.0 571