Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1578 ATGGTTCGGGGGAATATGGATAACTTCCTTGGATCCTCCCTAGAAGAGGGCATTGTGATTCTGTGTTTCACACATTCATGTCCACCAACAAAAAACCCACTCAAGCAAACTCGTCATCATGAAACTCCCTCTGCTACCAGCAGCACACTCAAAAAGCACTTCCCTTCTCCTTCTTCTTCTTCCTCATCATCATCATCAATTCAATTCCTCCTTTCTCCTTTTAAATCAACCTCCTTCATCTTCATCTTCATCCTCATCCTCACCCCCTCTTCTTCTTCTTCTTCAACACCACCAGCCATGAAGACTCCTCCTTGTCTTTTCCCTCTCACATTCTTCTTCTTCTTCTGTCAGATACAGCTTCTGGTTTTTTCTGCTACACCATCTGTCATCTTCTCTTTGCTTTCTCTCAAGTCTTCCCTCATTGACCCTCACAATACCCTCCATGACTGGAACTATTCTTCTTCTTCCTCCTCTAACAATTCTTCCCCAGACCTACCACATGTTTGGTGTTCATGGTCAGGTATCACGTGCCACGCACGGACTTCTCAGATCATAGCCATTGACCTTTCTCAGCGTAATCTCTCTGGTTCAATCTCTCCCCAAATCCGTTTCTTGACCAGCTTGAACCACTTGAATCTCAGCTGGAATGACTTCACTGGGATTTTCCCACCAGTGATTTTTGAACTCTCTGAGCTCAGAACTCTGGATATCAACCACAACTACTTCAATTCAACTTTCCCTTCTGGGATTTCCAGGCTCAAGTTCTTAAGAGTGTTCAATGCTTATAGCAATAACTTTGTTGGTCCTCTGCCTCAGGAATTCATGAGGCTTCGGTTTCTTGAGAAGTTGAACCTTGGTGGGAGCTACTTCAATGGTACAATTCCTTCTGGTTATGGGAATTTACCACGATTGAAGTTCCTTTATCTTGCTGGGAATCTCTTAGAAGGTCTAATACCATTTCAGTTAGGGTTCTTATCAGAATTGGAACATCTTGAAATTGGGTACAACCATTTTTCTGGAGGATTACCTGAAGAATTTGCATTATTATCAAGTCTGACATACTTGGATATTGCTTCTTCTAATCTCTCTGGCTCTCTGATTCATGATTTGGGAAACATAACTATGTTGGAGACATTGTTGCTGTACAAGAATCAGATAGTGGGTGAGATCCCATCGAGCTTGGGGAATTTGAAAAGTCTCAATGCACTTGATTTGTCAGATAACAAACTCAGTGGGTTAATTCCTGAGGAAATTTCAATGTTGAAGGAACTAACCATTTTGAGCTTGATGAACAACAAGTTAACGGGAGAGATACCACAAGGAATCGGAGATCTTCCAAAACTCGATACTCTGCTTCTGTGGAACAATTCGCTTTCTGGAATTCTCCCACAAACCCTTGGTTCCAATGGATTACTCCAGAAACTCGATGTTTCCACGAATTTACTCACAGGTTTCATCCCATCCAGTGTTTGCAATGGAAGCAAGCTTATCAAGCTCATTCTCTTTGATAACGAATTTGAAGGAGCTTTTCCAGAATCACTCATTAATTGCACTTCACTGGTAAGGCTTCGAATCCAAAATAATCGTCTCAACGGATCAATCCCCGGTGGTTTTGGCCTTCTTCCGAATCTTGCCTTCGCCGATATGAGCAACAACAGCTTCACGGGACGAATTCCAGAAGATTTCGGCGATGCTCCGACATTGCAACACTTGAATCTCTCTGGGAATTCATTCGAAAATCCACTACCAAGCAATATTTGGAATGCTAGGAATTTACTGGTTTTCTCGGCGATTTCATCGAAAATTAACGGTCAGATTCCAGATTTCGTAGGGTGCAAGAACATTTACAGGATCGAATTGCAGGGGAATTTCATCAATGGTAGCATCCCTTGGACAATTGAGAACTGCGAGAGGCTTATTGTGTTGAATCTGAGTCGTAATTCGCTTTCTGGTATCATCCCTTGGGAAATCTCCGTTCTACCCTCAATCACTGACGTTGACCTATCGCACAATTTTCTCTCCGGTACCATACCCTCCGGTTTCAACAACTGCACCACACTCGAGAACTTCAACGTCTCCTTTAATTCCCTCACCGGACCAATTCCTTCCGCCGGCTCAATCTTCCCGAACCTAAATCCGTCCTCCTTCTCCGGCAACGATGGCCTCTGCGGCGGTGTTATCGCAAAACCCTGCGCTATGGACACTACTCTCTCCCCTGCAACGGACGAACAACATTATCATCCCAAGAGAACCACCGGTGCAGTGATGTGGATCGTTGCAGCGGCGGTGGCGGTCGGATTGTTCGCTCTAGTCGCCGGAACCCGATGCTTCCGGTCTGATCACAGCCGTACGTTCATGAACAACTGCGAGATCGGACCCTGGAAATTAACCGCGTTCCAACGGTTGAATTTTACAGCAGAGGACGTGGTGGACTGCATGACAGTCTCGAACAAGATTATAGGGATGGGCTCCACTGGAACAGTGTTCAAAGTGGAGATGCCAAGTGGCGAGATCATAGCTGTTAAAAAGCTATGGGGCAAGCAAAAGGCGACCTCTAACAGCATCAGACGGCGGAGAGGGGTGCTAGCTGAAGTGGATGTATTAGGGAACGTGAGGCACAGGAACATAGTGAGATTGTTAGGGTGTTGCAGCAACAGGGAGAGCACCATGCTGCTCTATGAGTATATGCCCAATGGGAATTTAGAAGATCTGTTACATGGCAAAAATGTGGTTGGTGATTGGTTGACAAGGTACAACATAGCATTAGGAGTGGCACAGGGGATTTGTTATCTTCATCATGATTGTAATCCAGTGATCGTTCATCGGGATCTCAAACCGAGTAATATCTTGTTGGATGCCGAAATGGAAGCCCGAGTGGCAGATTTTGGAGTGGCCAAGTTGATTCAGAGTGATGAATCCATGTCTGTAATTGCGGGATCATATGGCTACATTGCTCCTGAATATGCATACACTCTACAAGTTGATGAGAAGAGTGATATTTATAGCTATGGGGTGTTGCTGATGGAGATTTTATGTGGAAGAAGATCGGTCGATGCAGAGTTTGGCGATGGCAATAGTATTGTGGATTGGGTTAAGTCAAAGATCAAGACTAAAAATGGGGTTGATTACGTATTAGATAAGAACGTCGGAGCCGGATGTGCTCCGGTGAGGGATGAGATGATACAAATGCTTAGGATTGCTTTGCTTTGCACTAGCCGGAATCCGGCGGATCGGCCTTCCATGAGAGATGTTGTGATGATGCTTCAAGAGGCCAAGCCAAAGAGGAAGATGTTTGATAATATTGTGTTAGGACAATGTGGTGATAAAGATATTAGCAGTGGTGGGGAGGATGATGATATTGTTTTGCCTCAAAAGGCAAAAGTGGAAATTTAA 3393 0.4456 MVRGNMDNFLGSSLEEGIVILCFTHSCPPTKNPLKQTRHHETPSATSSTLKKHFPSPSSSSSSSSSIQFLLSPFKSTSFIFIFILILTPSSSSSSTPPAMKTPPCLFPLTFFFFFCQIQLLVFSATPSVIFSLLSLKSSLIDPHNTLHDWNYSSSSSSNNSSPDLPHVWCSWSGITCHARTSQIIAIDLSQRNLSGSISPQIRFLTSLNHLNLSWNDFTGIFPPVIFELSELRTLDINHNYFNSTFPSGISRLKFLRVFNAYSNNFVGPLPQEFMRLRFLEKLNLGGSYFNGTIPSGYGNLPRLKFLYLAGNLLEGLIPFQLGFLSELEHLEIGYNHFSGGLPEEFALLSSLTYLDIASSNLSGSLIHDLGNITMLETLLLYKNQIVGEIPSSLGNLKSLNALDLSDNKLSGLIPEEISMLKELTILSLMNNKLTGEIPQGIGDLPKLDTLLLWNNSLSGILPQTLGSNGLLQKLDVSTNLLTGFIPSSVCNGSKLIKLILFDNEFEGAFPESLINCTSLVRLRIQNNRLNGSIPGGFGLLPNLAFADMSNNSFTGRIPEDFGDAPTLQHLNLSGNSFENPLPSNIWNARNLLVFSAISSKINGQIPDFVGCKNIYRIELQGNFINGSIPWTIENCERLIVLNLSRNSLSGIIPWEISVLPSITDVDLSHNFLSGTIPSGFNNCTTLENFNVSFNSLTGPIPSAGSIFPNLNPSSFSGNDGLCGGVIAKPCAMDTTLSPATDEQHYHPKRTTGAVMWIVAAAVAVGLFALVAGTRCFRSDHSRTFMNNCEIGPWKLTAFQRLNFTAEDVVDCMTVSNKIIGMGSTGTVFKVEMPSGEIIAVKKLWGKQKATSNSIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRESTMLLYEYMPNGNLEDLLHGKNVVGDWLTRYNIALGVAQGICYLHHDCNPVIVHRDLKPSNILLDAEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVLLMEILCGRRSVDAEFGDGNSIVDWVKSKIKTKNGVDYVLDKNVGAGCAPVRDEMIQMLRIALLCTSRNPADRPSMRDVVMMLQEAKPKRKMFDNIVLGQCGDKDISSGGEDDDIVLPQKAKVEI 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1578 1130 Gene3D Phosphorylase Kinase; domain 1 795 895 - -
Alju10g1578 1130 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 349 1090 - -
Alju10g1578 1130 FunFam Leucine-rich repeat receptor-like protein kinase TDR 418 733 - -
Alju10g1578 1130 Gene3D Ribonuclease Inhibitor 303 373 IPR032675 -
Alju10g1578 1130 Gene3D Ribonuclease Inhibitor 374 442 IPR032675 -
Alju10g1578 1130 SMART LRR_typ_2 325 348 IPR003591 -
Alju10g1578 1130 SMART LRR_typ_2 229 253 IPR003591 -
Alju10g1578 1130 SMART LRR_typ_2 205 224 IPR003591 -
Alju10g1578 1130 SMART LRR_typ_2 445 468 IPR003591 -
Alju10g1578 1130 SMART LRR_typ_2 421 444 IPR003591 -
Alju10g1578 1130 SMART LRR_typ_2 660 683 IPR003591 -
Alju10g1578 1130 SMART LRR_typ_2 397 420 IPR003591 -
Alju10g1578 1130 SMART LRR_typ_2 301 324 IPR003591 -
Alju10g1578 1130 Gene3D Transferase(Phosphotransferase) domain 1 896 1105 - -
Alju10g1578 1130 SMART serkin_6 814 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1578 1130 ProSitePatterns Protein kinases ATP-binding region signature. 820 843 IPR017441 GO:0005524
Alju10g1578 1130 SUPERFAMILY RNI-like 187 531 - -
Alju10g1578 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 319 414 - -
Alju10g1578 1130 Pfam Leucine rich repeat 519 577 IPR001611 GO:0005515
Alju10g1578 1130 Pfam Leucine rich repeat 614 671 IPR001611 GO:0005515
Alju10g1578 1130 Pfam Leucine rich repeat 376 434 IPR001611 GO:0005515
Alju10g1578 1130 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Alju10g1578 1130 ProSiteProfiles Protein kinase domain profile. 814 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1578 1130 MobiDBLite consensus disorder prediction 33 64 - -
Alju10g1578 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 939 951 IPR008271 GO:0004672|GO:0006468
Alju10g1578 1130 FunFam leucine-rich repeat receptor-like protein kinase TDR 896 1100 - -
Alju10g1578 1130 Gene3D Ribonuclease Inhibitor 443 737 IPR032675 -
Alju10g1578 1130 Gene3D Ribonuclease Inhibitor 131 297 IPR032675 -
Alju10g1578 1130 FunFam Leucine-rich repeat receptor-like protein kinase 129 296 - -
Alju10g1578 1130 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 782 895 - -
Alju10g1578 1130 Pfam Protein kinase domain 817 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1578 1130 SUPERFAMILY Protein kinase-like (PK-like) 817 1088 IPR011009 -
Alju10g1578 1130 SUPERFAMILY L domain-like 472 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1578 Alju-ChrAlju10 20604302 20610682 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1578 111 1096 Receptor kinase-like Gene Family AT1G08590 42.801 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju10g1578 Pkinase 1.3e-48 CL0016