Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1570 ATGATGGATCATAATACAAATTCTCTCTTCTTTGCAATTCATATTGCTTGCTTGGTTTTTTGGTCACTATACCATTTCCAGTTCACTTCAGGACTTTTAGAAACTGAAGCACTTCTCAGATGGAAGCAAAGTCTCCCATATCAACCAATTCAGGATTCATGGGTCTCTCCTCCACAAGCGAATTCCAGTATAGCCCAAACCCCATGTTCATGGCGTGGAGTAAAGTGTGATGCTTCAGGAAGTGTGGTTGAACTCAACTTGAATAACACTGGTCTCAAAGGTACCCTTAAAAACTTGAATTTCTCATCTTTCCCAAATCTTGTTCTTCTTAATCTCAAATTTAACCAGCTCACTGGTCCCATACCAGAGTCAATTGGGTTGCTATCAAAACTACAATTCCTTGACCTTAATCGTAATTATCTCAATGGCACTATACCTCTTTCTCTTTCTAATCTTACTAAACTTTATGAGCTTGACCTTTCACAGAATGATATAACCGGGATATTAGACCCTCGTCTATTCCCTGATGGATCTGATGAACCCAAAACAGGTTTGATTGGGATAAAAAATCTTGTGCTTCAGGGCTTGCTTCTTGGTGGCAAAATTCCAAATGAAATAGGGAATTTGAAACAGTTGACTACTCTAGCTCTATATCAAAATAGCTTTTACGGTCCTATACCTTTGTCTTTAGGGAATTGTACACATCTAAACATTCTCTCTTTGGCTGCAAACAGCTTCTCAGGTACAATTCCCTCTATTCTTGGTACATTACCAAATCTAACTGATGTTCGCTTGTTTATCAACAATTTCTCAGTGGGAATTTTACCTAGTGGGATCTTTCAGTTAAAGCAACTACAAAAGCTTGACTTGTCATCAAACTTTATATCTGGCGAGATTCCTCCTCAAATTGGAATGACCTCTATCTTGTACCATCTACATCTTGGTAGCAACAATCTTTCAGGTTTCATTCCACAAGACATTGGGAAGCTTTCTAGCTTGCAGTCTTTAGATCTGTCAATGAATAGCTTAAGGGGACCTATCCCTTATCAAATAGGTGATTGCTATAAGTTGCTGAATTTAAATCTTAGCAACAATTATTTTACTGGCGAAATCCCATACCAAATAGGAAATCTTGTGGCTTTACAAGATTTTCTGGACTTGAGTTACAATTCACTTTCTGGAGAAATCCCTGTTGATTTCAGTAAACTCAGCAAGTTGATCAGCTTGAACATGTCTCACAATAATTTTTCAGATTTTGGCACAGCAAGGTTCTTGAAGACCAATTCATCAATTTGGACAACATTTGCTGGCACGTATGGCTATGCCGCTCCTGAGCTTGCGTACACAATGGCAGTGACAGAGAAAGTTGATGTGTATAGCTTTGGTGTTTTGGTTATTGAGGTACTTATGGGAGAGCATCCTGGTGATTTAATGTCCCGTAACCAAACATATAGGTTTAATCAGATCAACTTCAAAGAGATTCTAGATCCACGTTTATCATCAACAAATCAGCAAAACTTGAAGAAATTGGCTCTGATTTGGCATCTAGCGCTTTCATGCTTACAAGCAAATCCTCAATCTCGTCCAACCATGCGAGGTGTCGCCCAGTTGATGGAAATGGAGAGTGCTCATGAAACATGA 1641 0.3882 MMDHNTNSLFFAIHIACLVFWSLYHFQFTSGLLETEALLRWKQSLPYQPIQDSWVSPPQANSSIAQTPCSWRGVKCDASGSVVELNLNNTGLKGTLKNLNFSSFPNLVLLNLKFNQLTGPIPESIGLLSKLQFLDLNRNYLNGTIPLSLSNLTKLYELDLSQNDITGILDPRLFPDGSDEPKTGLIGIKNLVLQGLLLGGKIPNEIGNLKQLTTLALYQNSFYGPIPLSLGNCTHLNILSLAANSFSGTIPSILGTLPNLTDVRLFINNFSVGILPSGIFQLKQLQKLDLSSNFISGEIPPQIGMTSILYHLHLGSNNLSGFIPQDIGKLSSLQSLDLSMNSLRGPIPYQIGDCYKLLNLNLSNNYFTGEIPYQIGNLVALQDFLDLSYNSLSGEIPVDFSKLSKLISLNMSHNNFSDFGTARFLKTNSSIWTTFAGTYGYAAPELAYTMAVTEKVDVYSFGVLVIEVLMGEHPGDLMSRNQTYRFNQINFKEILDPRLSSTNQQNLKKLALIWHLALSCLQANPQSRPTMRGVAQLMEMESAHET 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1570 546 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Alju10g1570 546 Pfam Protein kinase domain 414 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1570 546 Gene3D Ribonuclease Inhibitor 33 176 IPR032675 -
Alju10g1570 546 Gene3D Ribonuclease Inhibitor 183 270 IPR032675 -
Alju10g1570 546 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 183 429 - -
Alju10g1570 546 SUPERFAMILY L domain-like 62 425 - -
Alju10g1570 546 Gene3D Ribonuclease Inhibitor 271 373 IPR032675 -
Alju10g1570 546 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 416 532 - -
Alju10g1570 546 ProSiteProfiles Protein kinase domain profile. 236 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1570 546 SMART LRR_typ_2 128 151 IPR003591 -
Alju10g1570 546 SMART LRR_typ_2 330 354 IPR003591 -
Alju10g1570 546 SMART LRR_typ_2 403 426 IPR003591 -
Alju10g1570 546 SMART LRR_typ_2 152 176 IPR003591 -
Alju10g1570 546 SMART LRR_typ_2 282 306 IPR003591 -
Alju10g1570 546 PRINTS Leucine-rich repeat signature 155 168 - -
Alju10g1570 546 PRINTS Leucine-rich repeat signature 330 343 - -
Alju10g1570 546 Pfam Leucine Rich Repeat 284 301 IPR001611 GO:0005515
Alju10g1570 546 Gene3D Transferase(Phosphotransferase) domain 1 405 546 - -
Alju10g1570 546 SMART serkin_6 349 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1570 546 FunFam Nuclear pore complex protein NUP107 32 174 - -
Alju10g1570 546 SUPERFAMILY Protein kinase-like (PK-like) 416 536 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1570 Alju-ChrAlju10 20185407 20188393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1570 9 419 Receptor kinase-like Gene Family AT4G08850 37.440 2.92e-64 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju10g1570 Pkinase 2.3e-16 CL0016