Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1540 ATGGCCCCAAACTGCACACAGAAATCAAGCAGCACATCAAAAATATACAACGACGAAGAAGAAAGCTTCAGCTACGCCATGCAGGTGGTGATGTCCAGTGTTCTGCCAATGGCGTTGCAAACGACAATAGAACTCGGCGTTTTGGAGGTCATAGCAAAAGCTGGAGGAGGCGCCAAGCTCTCTGCAAACGACATTGCGTTGCAGCTTCCGATGATGGAGAACCCGGACGCACCCAAAATGCTGGATCGGCTTCTCGGACTCCTCGCGACTCACTCTCTGCTTCGTTGCTCTGATGAGGAAGAAGAAGAAGAAGAAGAGGGGATTAAATATGGTGCGCGCGGCCACAGAGTAAGACTGTACAGCCTCGCGCCTGCTTCCAAGTTCTTTGTTGCTGATGATGATCATGCTACGTCGCTTGGGCCTCTTCTGGCTATGGTTCAGCATAAGACCTATTTGGAAAGCTGGTTTCATTTAAAAGAAGCAATTGTAAAAGGAGGAACAGCCTTTGAGAGGGGTCATGGAGGAAAAGCAAAGTTTGAATACATAGGAATGAACTCACAGATTAATCAAATATTCAACACAGCATCGATTCATCAAAGTTGCATAGTGATGAAGAAGGTTCTAGAATGTTACAAAGGCTTTGAGCATCTGAATTCTCTTGTGGATGTTGGAGGTGGCCTTGGACTTACCCTCAGCTTCATCACTTCTAAATATCCTAATCTTAAGGCCATCAATTTTGATTTGCCTCATGTTATTAATCACGCCCCTTCCTATCCAGGTGTTCAACACGTGGCAGGAGATATGTTTGAGGCTATACCCAAGGGGGATGCCATGTTCATGAAGTGGATTCTTCATGACTGGAATGACAAAAAGTGCTTGAAGCTATTGAAGAATTGCTGCAAGTCCATTCCAGAAGATGGGAAGGTGATTGCAATGGAATCAGTGATATCTGATATGCCTCAGGCCTCTGCTTCTGCAAAGTGCAACTTCCAAATTGATGTGTTCATGATGGCTCAAGGTGCTGCTGGTGGAAGACTTCGAACCCATCAAGATTTTTTCAACCTTGCAAAAGCTGCTGGATTTAAGGATGTTCAATTCCAGTGTTTTGTTCGTAATTTCTGGGTCATGGAGTTCTTAAAGTAG 1143 0.4497 MAPNCTQKSSSTSKIYNDEEESFSYAMQVVMSSVLPMALQTTIELGVLEVIAKAGGGAKLSANDIALQLPMMENPDAPKMLDRLLGLLATHSLLRCSDEEEEEEEEGIKYGARGHRVRLYSLAPASKFFVADDDHATSLGPLLAMVQHKTYLESWFHLKEAIVKGGTAFERGHGGKAKFEYIGMNSQINQIFNTASIHQSCIVMKKVLECYKGFEHLNSLVDVGGGLGLTLSFITSKYPNLKAINFDLPHVINHAPSYPGVQHVAGDMFEAIPKGDAMFMKWILHDWNDKKCLKLLKNCCKSIPEDGKVIAMESVISDMPQASASAKCNFQIDVFMMAQGAAGGRLRTHQDFFNLAKAAGFKDVQFQCFVRNFWVMEFLK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1540 380 FunFam Caffeic acid 3-O-methyltransferase 5 129 - -
Alju10g1540 380 PANTHER O-METHYLTRANSFERASE 27 361 IPR016461 GO:0008168
Alju10g1540 380 SUPERFAMILY "Winged helix" DNA-binding domain 18 132 IPR036390 -
Alju10g1540 380 Pfam O-methyltransferase domain 155 362 IPR001077 GO:0008171
Alju10g1540 380 PIRSF O-mtase 4 380 IPR016461 GO:0008168
Alju10g1540 380 Gene3D - 5 129 IPR036388 -
Alju10g1540 380 Pfam Dimerisation domain 37 89 IPR012967 GO:0046983
Alju10g1540 380 Gene3D Vaccinia Virus protein VP39 131 380 IPR029063 -
Alju10g1540 380 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 380 IPR016461 GO:0008168
Alju10g1540 380 FunFam Caffeic acid O-methyltransferase 131 380 - -
Alju10g1540 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 378 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1540 Alju-ChrAlju10 18982110 18986696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1540 19 380 Monolignol Biosynthesis Gene Families AT5G54160 48.066 9.04e-118 344