Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1464 ATGCCTACATCAGTTCTTGATGGTCAGTCTGGAGAAAAATTACTTCGGAAGCCATTTGCAATTCGTGATTACCCGCCTGGGGTTGGACCAAATGCTGCAAGAATCCATGTTACACCTAAAGAAGATACTGCTAAGGGTGGTGAGCCTAATCGTCAACACTCTGCCACTAGAAGATTTGTTTCTGCTATTAGAGACTATCCTCCTTTTTGTGGACGTAATTCTCAGGGACTGAGTAAGGCAGATGTTTCCAAGCTCATGCAGAGGCATTTGAGTGGTGCTGCGGAAGAAAGGAAGAGAAAACCTGATTGCCTCACATGGGGTAATGGATCTAAAGCTGTGATGAGGACTAAAGACTCTCTGAATCATTCCAACATGAAGGTTTTAAAAAAGAAAGAAGGAAATGCCACTTCTGGAGCTATGGGTAGGCTTGTAGTCATAGGAAAAAATGATCGTGATACCAATTATAGCAGAAAATTTAATGGTAGCCAGAGATCATGTGGTGTAAATGTTCCACTTCTGCGTCATCGTGATTTGAGCATTCACAAAAATGACACTGTTGTGACACGAGATACTGTAAGAGACACATTGCGCTTGTTCCAAGCTCTTTGTAGAAAATTATTGCAAGAATTAGAAGCAGAGTCAAAAGGCCAAGCAAAAATTCGTAGGAGGATTGATTTAGAGGCAGCAACGAGACTTAAAAAGGAAGGCAAATATATTAACTCAGGCAAGTACATCTTTGGTTCTGTTCCTGGTGTTGAAATAGGTGATGAGTTTGACTATAGAGTGGAGCTTAATTTAGTTGGTCTTCATCGCAATTTACAGGCTGGCATAGATTATGCAATGCGCAATGGTGAGCGTCTTGCAACTAGTATTGTTGCATCTGGGGGATACAATGATGAGTTGGATAATTCAGGTGTTTTGATTTATTCAGGGCATGGGGGGAATGTGATGTCCAAAAAGAAAGAACCTGAAGACCAGAAGCTTGAGCGGGGTAATCTTGCCTTGAAGAATAGTAGCAAGAAAAAGAATCCTGTTAGAGTGATACGTGGTGCTTTCTTTGGAGGTGGAAGTCGTAGGACATTTGTGTATGATGGACTGTATGAAGTTGAGTCATACTGGCAAGAAAGGGGGCCACATGGCAAGATGGTTTTCAAGTTTCAGCTACGAAGAATCCCGGATCAACCCGAGCTTCCTTGGATTGAACTGAAGAATTCCAACATGTTCACATTAAGGAAGGGCTTGTGTGTTGTTGACATCTCACATGGTAAAGAGGCATTACCAATTCGTGCTGTGAATACCATAGACAATGAAAAACCACCTTCATTTGAATATATCACTAGGATGATTTGCCCTGGCTGGTTGCAGCCAATACCTTATAAGGGATGTAACTGTACAGACAGATGCTCTGACCCTACAAGATGTTCTTGTGCTGTGAAAAATGGAGGAATCCCATTCAATCACACAGGATGTATTGTAGAAGTAAAGCCTCTAGTCTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCAGATTGCTATAGCAGAGTCAGCCAACATGGCATAAAATTGCCACTTGAAATTTATAAAACTGAAAAAAGGGGATGGGGTGTGAGATCTCTATGCTCCATCCCTTCTGGAAGTTTTGTGTGCGAATACATAGGGGAGTTGCTTGAAGACAAGGAAGCCGAACAAAGAACTGGTCATGATGAGTATCTGTTTGACATAGGTAATAACTTGATCAATAATGGTATACTTTCTGAAGGAATCTCCAGGCCTGAAGTCTCCAAGGGTGGTGGTGGTTTCACCATTGATGCAGCTCGGTATGGTAATCTGGGCAGATTTTTCAACCATAGTTGCGCCCCTAATATGTATGCACAAGATGTTTTGTATGATCATGGCGACCGCAGGATTCCTCACGTAATGCTGTTTGCGGCTGAGAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTCAAAAGGTCAAATCTTCAATTCTGACGGCAGCATAAAGAAGAAGGATTGCTTTTGTGGCTCTGTGGGATGCACTGGAAGGATGTATTGA 2067 0.4214 MPTSVLDGQSGEKLLRKPFAIRDYPPGVGPNAARIHVTPKEDTAKGGEPNRQHSATRRFVSAIRDYPPFCGRNSQGLSKADVSKLMQRHLSGAAEERKRKPDCLTWGNGSKAVMRTKDSLNHSNMKVLKKKEGNATSGAMGRLVVIGKNDRDTNYSRKFNGSQRSCGVNVPLLRHRDLSIHKNDTVVTRDTVRDTLRLFQALCRKLLQELEAESKGQAKIRRRIDLEAATRLKKEGKYINSGKYIFGSVPGVEIGDEFDYRVELNLVGLHRNLQAGIDYAMRNGERLATSIVASGGYNDELDNSGVLIYSGHGGNVMSKKKEPEDQKLERGNLALKNSSKKKNPVRVIRGAFFGGGSRRTFVYDGLYEVESYWQERGPHGKMVFKFQLRRIPDQPELPWIELKNSNMFTLRKGLCVVDISHGKEALPIRAVNTIDNEKPPSFEYITRMICPGWLQPIPYKGCNCTDRCSDPTRCSCAVKNGGIPFNHTGCIVEVKPLVYECGPSCKCPPDCYSRVSQHGIKLPLEIYKTEKRGWGVRSLCSIPSGSFVCEYIGELLEDKEAEQRTGHDEYLFDIGNNLINNGILSEGISRPEVSKGGGGFTIDAARYGNLGRFFNHSCAPNMYAQDVLYDHGDRRIPHVMLFAAENIPPLKELTYDYNYSKGQIFNSDGSIKKKDCFCGSVGCTGRMY 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1464 688 Pfam Pre-SET motif 419 514 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju10g1464 688 Gene3D - 228 410 IPR036987 -
Alju10g1464 688 ProSiteProfiles Post-SET domain profile. 672 688 IPR003616 -
Alju10g1464 688 ProSiteProfiles SET domain profile. 522 658 IPR001214 GO:0005515
Alju10g1464 688 SMART PostSET_3 672 688 IPR003616 -
Alju10g1464 688 Gene3D SET domain 411 688 IPR046341 -
Alju10g1464 688 SUPERFAMILY PUA domain-like 228 403 IPR015947 -
Alju10g1464 688 ProSiteProfiles YDG domain profile. 247 390 IPR003105 -
Alju10g1464 688 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 72 680 - -
Alju10g1464 688 ProSiteProfiles Pre-SET domain profile. 460 519 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju10g1464 688 SMART preset_2 416 506 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju10g1464 688 Pfam SAD/SRA domain 246 394 IPR003105 -
Alju10g1464 688 SUPERFAMILY SET domain 405 665 IPR046341 -
Alju10g1464 688 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 111 688 IPR025794 GO:0016571
Alju10g1464 688 Pfam SET domain 533 658 IPR001214 GO:0005515
Alju10g1464 688 SMART set_7 522 664 IPR001214 GO:0005515
Alju10g1464 688 SMART G9a_1 242 394 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1464 Alju-ChrAlju10 17509659 17511725 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1464 189 685 Su(var)3-9 homologs AT5G04940 39.652 4.10e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju10g1464 SAD_SRA 4.7e-50 CL0178