Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1462 ATGACTACATCTACATCAATTCTTGACGGTCATTCTGAAGAAAGAATGCTAAGAAAGCTATCTGCACATCGTAATTACCCGCCTGGCGTTGGACGGACTAGCAGAGTTTTTCCTGTGAGAAGAGTCTCAGCCGTTAGAGACTATCCTCCATTTTGTGGGCCTAATGCTCCCAGTCTGAGTAAGGGAGATGTTTCCAAGGGCAAAGGTACAGAAGAAAGGAAGAGAAAATTTGATTTCCTTGCACGGGGCGGTGGGTCTAAAACTGTGATGACGGCTAAAAAATCTGTGAATCATTCCTGGATGATGCTTGTGAAAAAGAAAGACGACAATGCTTCTTCTGGAGGTATGGTTGGAAAATTTTCTGATGTCCACAGATCATATTGTTATAATGTAAATGTTCCATTTCTATGTCGTGAGAATTTGAGCAGAGGCAACAGTGACACAGATGTCACCCGAAATACTGTAAGGGAGATAATGCGCTGGTTCCAAGCTGTTTGTAGAAAATTGTTGCAAGAAGAAGAAGCAAAGTTAAAAGGCAAAGCAAAAATTCGAAGGAGGATTGATTTAGAGGCTGCAAAGATACTTAAAAAGGAAGGCAGATATATTAATTCAGGCAAGTACATCTTTGGTTCTGTTCCTGGGGTTGAAATAGGTGATGAGTTTGACTATAGAATGGAGCTCCATTTAGTCGGTCTTCATCGCAATTCACAGGCTGGCATAGATTATGCAATGCGCAATGGTGAACATCTTGCAACTAGTATTGTTGCATCAGGGGGATATAATGATGAGTTGGATAATTCAGGTGTTTTGATTTATTCAGGGCACGGGGGGAATGTGATGTCCAAAAAGAAAGCACCTGAAGACCAGAAGCTTGAGCGGGGTAATCTTTCTTTGAAGAATAGTAGCAAGAAAAAGAATCCTGTTAGGGTGATACGCGGTGCTTTCTTTGGAGGTGGAAGTCGTAGGACATTTGTGTATGATGGACTGTATGAAGTTGAGACATACTGGCAAGAAAGGGGGCCACATGGTAAGATGATTTTCAAGTTTCGGCTACGAAGAATCCCAAATCAACCCGAGCTTCCTTGGATTGAACTGAAGAATTCCAACATGTTCACATTAAGAAAGGGTTTGTGTGTTGCTGACATCTCAAATGGTAAAGAGGCATCGCCAATCCGTGCTGTCAATACCATAGATAACGAAAAACCACCAATCTTTGAATATATCACTAGGTTGATCTACCCTAGTTGGTTGCAGCCAACACCTTCTAAGGGATGTAACTGTACCGACAGATGCTCTGACCCTACAAGATGTTCTTGTGCTGTGAAAAATGGAGGAATCCCATTCAATCACACAGGGTGTTTAGTAGAAGTAAAGCCCCTAGTCTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCAGATTGCTATACCAGAGTCAGCCAAAGTGGCATAAAATTCCCACTCGAAATTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTCTACGCTCCATCCCTTCTGGAAGTTTTGTATGTGAATACATAGGAGAGTTGCTTGAAGACAAGGAAGCTGAGAGGAGAACTGGTCATGATGAGTATCTATTCGATATTAGTGATAATTTGATCAACAATGCTGTAGACTCTGGTGGTGGCTTCACTATTGATGCAGCTCGCTTTGGTAATCTGGGCAGATTTTTCAACCATAGTTGCGCCCCTAATATGTATGCACAAAATGTTCTGTATGATCATGGCGACCACAGGATTCCTCACATAATGCTCTTTGCTACTGAGAACATTCCTCCATTAAAAGAGCTGACTTGTGATTACAATTACTCAAAAGATGAAATCTTCGATTTGGATGGCAACATAAAGAAGAAAAATTGCTATTGCGGCTCTGTGGGCTGTACTGGAAGGATTTATTGA 1923 0.4181 MTTSTSILDGHSEERMLRKLSAHRNYPPGVGRTSRVFPVRRVSAVRDYPPFCGPNAPSLSKGDVSKGKGTEERKRKFDFLARGGGSKTVMTAKKSVNHSWMMLVKKKDDNASSGGMVGKFSDVHRSYCYNVNVPFLCRENLSRGNSDTDVTRNTVREIMRWFQAVCRKLLQEEEAKLKGKAKIRRRIDLEAAKILKKEGRYINSGKYIFGSVPGVEIGDEFDYRMELHLVGLHRNSQAGIDYAMRNGEHLATSIVASGGYNDELDNSGVLIYSGHGGNVMSKKKAPEDQKLERGNLSLKNSSKKKNPVRVIRGAFFGGGSRRTFVYDGLYEVETYWQERGPHGKMIFKFRLRRIPNQPELPWIELKNSNMFTLRKGLCVADISNGKEASPIRAVNTIDNEKPPIFEYITRLIYPSWLQPTPSKGCNCTDRCSDPTRCSCAVKNGGIPFNHTGCLVEVKPLVYECGPSCKCPPDCYTRVSQSGIKFPLEIYKTDKRGWGVRSLRSIPSGSFVCEYIGELLEDKEAERRTGHDEYLFDISDNLINNAVDSGGGFTIDAARFGNLGRFFNHSCAPNMYAQNVLYDHGDHRIPHIMLFATENIPPLKELTCDYNYSKDEIFDLDGNIKKKNCYCGSVGCTGRIY 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1462 640 SMART G9a_1 205 357 IPR003105 -
Alju10g1462 640 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 59 640 IPR025794 GO:0016571
Alju10g1462 640 ProSiteProfiles Pre-SET domain profile. 423 482 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju10g1462 640 ProSiteProfiles YDG domain profile. 210 353 IPR003105 -
Alju10g1462 640 SMART set_7 485 616 IPR001214 GO:0005515
Alju10g1462 640 Pfam SAD/SRA domain 209 357 IPR003105 -
Alju10g1462 640 Pfam Pre-SET motif 382 477 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju10g1462 640 SMART preset_2 379 469 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju10g1462 640 Gene3D - 192 373 IPR036987 -
Alju10g1462 640 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 41 632 - -
Alju10g1462 640 ProSiteProfiles SET domain profile. 485 610 IPR001214 GO:0005515
Alju10g1462 640 SUPERFAMILY SET domain 368 617 IPR046341 -
Alju10g1462 640 SUPERFAMILY PUA domain-like 191 366 IPR015947 -
Alju10g1462 640 Pfam SET domain 496 610 IPR001214 GO:0005515
Alju10g1462 640 ProSiteProfiles Post-SET domain profile. 624 640 IPR003616 -
Alju10g1462 640 Gene3D SET domain 374 640 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1462 Alju-ChrAlju10 17430461 17432383 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1462 152 637 Su(var)3-9 homologs AT5G04940 38.996 2.69e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju10g1462 SAD_SRA 1.9e-49 CL0178