Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1458 ATGGCTACTTCAACATCAGTTCTTGATGGTCTTTCTGAAGAAAAAATGATAAAGAAGGCATCTGCAATTTGTGATTACCCGCCTGGGTTTGGACCCAAATTAGCTCGTTCGAATGATTATTTGCAGAAGGTTGGGACTAGAAGGTCTTCTTCTGCAAGAAGAGTTTCAGCCATTAGAGACTATCCTCCATTTTGTGGGCCTAATGCTCTGAGTCAGAGTAAAGGAGATGTTTCCAGCAGCAAGCTCACGGCCGGACATTTGAGTGGTCGTACAGAAGAAAGGAAGAGAAAGCTTGATTGCCTTGCACGGGGTAATGGGTCTAAAACTGTGATGACGGCTAAAAAATCTTTGAATCATTCCAAGATGATGCTTGTGATAGAGAAAGAAGGAAATGCTTCTTCTGGAGGTATGGATGGAACATTTTCTGATGTCCACAGATCATATGGTTATAGTGTAAATGTTCCACTTCTACGTCATGATAATTTGAGCAGTGGAACCAGTGACACAAATGTGACCCGAAATACTGTAAGGGAGATAATGCGCTGGTTCCAAGCTGTTTGCAGAAAATTGTTGCAAGAAGAAGAAGCAAAGTTAAAACGCAAAGCAAAAATTCATAGGAGGATTGATTTAGAGGCAGCAAAGATCCTTAAAAGGGAAGGCAAATATGTTAATGCTGACAAGCTGATCTTTGGTTCTGTCCCTGGGGTTGAAATAGGTGATGAGTTTGACTATAGAGTGGAGCTTCACCTAGTCGGTCTTCATCGCAATTTACAGGCTGGCATAGATTATGCAATGCACAATGGTGAACATCTTGCAATTAGTATTGTTGCATCAGGGGGATACAATGATGAATTGGACAATTCAGGTGTTTTGATTTATACAGGGCACGGAGGGAATGTGATGTACAGTAGTAAACAGCCTGAAGACCAAAAGCTTGAGCGGGGTAATCTTGCTTTGAAGAACAGTAGCAAGAAAAAGAATCCTGTTAGAGTGATACGTGGTGCTTTCTTTGGAGGTGGAAGTCGTAGGAGATTTGTGTATGATGGATTGTATGAAGTTGAGACATACTGGCAAGAAATGGGACCACATGGCAAGATGATTTTCAAGTTTAAGCTTCGAAGAAACTCAAATCAACCAGAGCTTCCTTGGATTGAACTGGAGAATTCAAAAAAGTTCACATTAAGAATGAGTTTATGTGTTGGTGACATCTCACATGGTAAAGAGGCTTTACCAATTCGTGCTGTGAATACCATAGATCATGAAAAACCACCATCATTTGAATACATTACTAGAATGATCTATCCTGATTGGTTGCATCCGGCACCTGCTAAAGGATGTAACTGTATTGACAGATGCTCTGACCCTACAAGATGTTCTTGTGCTGTTAAAAATGGCGGAATCCCATTTAATCACACAGGGTGTATTGTAGAAGTAAAGCCTCTAGTCTTTGAGTGTGGCCCTTCTTGCAAATGCCCTCCTGATTGCTATAACAGAGTCAGCCAACATGGCATAAAATTCCCACTTGAAATTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTCTACACTCGATCCCTTCTGGAAGTTTTGTATGTGAATACATAGGAGAGTTGCTTGAAGACAAGGAAGCTGAACAAAGAACTGGTCATGATGAGTATCTGTTTGCCATAGGTAATAACTTGATCAAGAATGGTATACTTTCTGATGGAGTTTCCACGCTTGAAGTCTCTGAGGATGGTGGTGGCTTCACCATCGATGCAGCCCGATATGGTAATCTGGGCAGGTTTTTCAACCATAGTTGTGCCCCTAATATGTATGCACAAAATGTTCTGTATGATCATGGGGACCGCAGGATTCCTCATATAATGTTGTTTGCTGCTGAGAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTCGAAAGATCAAATCTTCGATTCTGATGGCTACATAAAGAAGAAGGATTGCTATTGTGGTTCTGTGGGGTGTACTGGAAGGATGTATTGA 2019 0.4106 MATSTSVLDGLSEEKMIKKASAICDYPPGFGPKLARSNDYLQKVGTRRSSSARRVSAIRDYPPFCGPNALSQSKGDVSSSKLTAGHLSGRTEERKRKLDCLARGNGSKTVMTAKKSLNHSKMMLVIEKEGNASSGGMDGTFSDVHRSYGYSVNVPLLRHDNLSSGTSDTNVTRNTVREIMRWFQAVCRKLLQEEEAKLKRKAKIHRRIDLEAAKILKREGKYVNADKLIFGSVPGVEIGDEFDYRVELHLVGLHRNLQAGIDYAMHNGEHLAISIVASGGYNDELDNSGVLIYTGHGGNVMYSSKQPEDQKLERGNLALKNSSKKKNPVRVIRGAFFGGGSRRRFVYDGLYEVETYWQEMGPHGKMIFKFKLRRNSNQPELPWIELENSKKFTLRMSLCVGDISHGKEALPIRAVNTIDHEKPPSFEYITRMIYPDWLHPAPAKGCNCIDRCSDPTRCSCAVKNGGIPFNHTGCIVEVKPLVFECGPSCKCPPDCYNRVSQHGIKFPLEIYKTDKRGWGVRSLHSIPSGSFVCEYIGELLEDKEAEQRTGHDEYLFAIGNNLIKNGILSDGVSTLEVSEDGGGFTIDAARYGNLGRFFNHSCAPNMYAQNVLYDHGDRRIPHIMLFAAENIPPLKELTYDYNYSKDQIFDSDGYIKKKDCYCGSVGCTGRMY 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1458 672 SUPERFAMILY SET domain 391 643 IPR046341 -
Alju10g1458 672 ProSiteProfiles YDG domain profile. 231 374 IPR003105 -
Alju10g1458 672 SMART G9a_1 226 378 IPR003105 -
Alju10g1458 672 MobiDBLite consensus disorder prediction 71 86 - -
Alju10g1458 672 ProSiteProfiles Pre-SET domain profile. 444 503 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju10g1458 672 Gene3D - 213 395 IPR036987 -
Alju10g1458 672 SMART PostSET_3 656 672 IPR003616 -
Alju10g1458 672 SUPERFAMILY PUA domain-like 215 387 IPR015947 -
Alju10g1458 672 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 52 664 - -
Alju10g1458 672 Gene3D SET domain 396 672 IPR046341 -
Alju10g1458 672 Pfam SAD/SRA domain 230 378 IPR003105 -
Alju10g1458 672 ProSiteProfiles SET domain profile. 506 642 IPR001214 GO:0005515
Alju10g1458 672 MobiDBLite consensus disorder prediction 69 89 - -
Alju10g1458 672 SMART set_7 506 648 IPR001214 GO:0005515
Alju10g1458 672 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 82 672 IPR025794 GO:0016571
Alju10g1458 672 Pfam Pre-SET motif 403 498 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju10g1458 672 ProSiteProfiles Post-SET domain profile. 656 672 IPR003616 -
Alju10g1458 672 SMART preset_2 400 490 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju10g1458 672 Pfam SET domain 517 642 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1458 Alju-ChrAlju10 17375369 17377387 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1458 229 672 EF-hand Containing Proteins AT5G13960 39.875 7.83e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju10g1458 SAD_SRA 3.6e-48 CL0178