Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1457 ATGTTTGTGCATAGAAACTCCATAGCTGTTTTGGTGATTCCCATTATTGCTGTTTTTGCATATTTCATTGGCGTCCATGAGACTAATCAAAATGAGCAGTCTTTTGTGGGTGATCTGTCGTCGTCGTGTCCTTTGAGTCGTGGTCATCGCCGCCGCCACCACCACCATCACTCCCACCACAAGAAGCGACCTGATGACAGTGGGATTGTTAGCAACATATGCGATGACTTTCCACCGGGAATTCCGCCGCCGAACACCAACACGACAACGTATCTGTGTGTGGATAGACGAGGGTGCTGCAATTTCACCACTGTGCAAGCAGCCGTAAATGCTGTCCCAGATTTCAGCGATAAAAGAAACATTATATGGATTAACAGTGGCCTTTACTATGAGAAAGTGATGGTGCCAAAAAGCAAACCAAACATCACATTTGAAGGACAGGGCTACACTTCAACGGCAATTGCATGGAACGACACTGCCAAGTCAGCAAACGGCACATTCTATAGTGGCTCCGTCCAAGTCTTCGCCTCCAACTTCATTGCCAAAAACATAAGCTTCATGAATGTGGCACCAATTCCAGGTCCAGGGGTGGATGGAGCACAAGCAGTGGCAATAAGAATAGGGGGTGATCAGGCTCAGTTCTGGGGATGTGGGTTTTTTGGAGCACAAGATACTCTTCATGATGATAGGGGTCGCCATTACTTTAGGGATTGTTATATCCAAGGCTCCATTGATTTCATCTTTGGCAATGCAAGGTCTCTCTATGAGAATTGTCAACTAGTGTCAATTGCCAACCCAGTCCCACCGGGACAAAAGTTCATAAACGGCGCCGTTACAGCTCAAGGGAGGTCATCAAACGACGAAAACACAGGCTTTGCTTTTGTCAACTGTAGCGTAGGAGGCTACGGAAGAATATGGTTAGGTCGGGCGTGGCGTCCTTATTCTCGTGTCGTTTTTGCCTTTACGACAATGTCTGATATTATTGCCCCTGAAGGTTGGAACGACTTCAATGACCCTTCAAGAGATCAGACAATATTCTATGGAGAATACAACTGCACAGGGCCAGGGGCTAATATGAATATGAGGGCACCATATGTACAGAGATTAAGTGATACAATTGCTTCTAATTTCCTTAACACATCATTTATTGATGGAGACCAATGGCTGTTCCCTCCCAAATAA 1182 0.4585 MFVHRNSIAVLVIPIIAVFAYFIGVHETNQNEQSFVGDLSSSCPLSRGHRRRHHHHHSHHKKRPDDSGIVSNICDDFPPGIPPPNTNTTTYLCVDRRGCCNFTTVQAAVNAVPDFSDKRNIIWINSGLYYEKVMVPKSKPNITFEGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPGPGVDGAQAVAIRIGGDQAQFWGCGFFGAQDTLHDDRGRHYFRDCYIQGSIDFIFGNARSLYENCQLVSIANPVPPGQKFINGAVTAQGRSSNDENTGFAFVNCSVGGYGRIWLGRAWRPYSRVVFAFTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCTGPGANMNMRAPYVQRLSDTIASNFLNTSFIDGDQWLFPPK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1457 393 ProSitePatterns Pectinesterase signature 2. 240 249 IPR033131 -
Alju10g1457 393 Gene3D - 85 391 IPR012334 -
Alju10g1457 393 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 80 389 - -
Alju10g1457 393 MobiDBLite consensus disorder prediction 46 62 - -
Alju10g1457 393 MobiDBLite consensus disorder prediction 46 67 - -
Alju10g1457 393 FunFam Pectinesterase 86 393 - -
Alju10g1457 393 SUPERFAMILY Pectin lyase-like 90 390 IPR011050 -
Alju10g1457 393 Pfam Pectinesterase 94 386 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1457 Alju-ChrAlju10 17354993 17361379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1457 63 389 Carbohydrate Esterase AT1G05310 72.783 0.0 525