Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1453 ATGGACATGTCTTCTGACATCTCACATGGCGCTTCGTCTTCTCCATACAGAGGTGTTCGCAAGAGAAAATGGGGCAAATGGGTGTCTGAAATCAGAGAGCCCGGCAAAAAGACCAGAATTTGGTTGGGCAGCTTCAAGACGCCGGAGATGGCCGCCGCCGCCTACGACGTCGCCGCGCTGCACTTCCGGGGACGTGACGCGAGGCTCAACTTCCCTGAGCTCGCTGGCAGCCTGCCCCGTCCGGCCAGTAATGACGCCGATGACATTCGCATGGCGGCACATGAGGCTGCCTTGACGCTGATGACGGCGGGGTCCGCCACATCTCTCGAGCAGTCTTCGGGCTCCGAGGTATCGCCGGTGATGGTCGGACTCTCGCCGATGCAGATTCAGGCGATCAATGAGATGCCGTTGGACTCGCCGAGGATGTGGATGCAAATGGCGGACTCAATGATGTTGGATGAAACGACGGCGTTTACGTATGAGTATGACGGGGATATGCAGAGTGATTCTCTGTGGGATCCATAG 525 0.5771 MDMSSDISHGASSSPYRGVRKRKWGKWVSEIREPGKKTRIWLGSFKTPEMAAAAYDVAALHFRGRDARLNFPELAGSLPRPASNDADDIRMAAHEAALTLMTAGSATSLEQSSGSEVSPVMVGLSPMQIQAINEMPLDSPRMWMQMADSMMLDETTAFTYEYDGDMQSDSLWDP 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1453 174 CDD AP2 16 74 IPR001471 GO:0003700|GO:0006355
Alju10g1453 174 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Alju10g1453 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 132 - -
Alju10g1453 174 Pfam AP2 domain 16 64 IPR001471 GO:0003700|GO:0006355
Alju10g1453 174 PRINTS Ethylene responsive element binding protein signature 54 74 IPR001471 GO:0003700|GO:0006355
Alju10g1453 174 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Alju10g1453 174 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Alju10g1453 174 Gene3D AP2/ERF domain 15 73 IPR036955 GO:0003700|GO:0006355
Alju10g1453 174 FunFam Ethylene-responsive transcription factor 2 14 73 - -
Alju10g1453 174 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1453 Alju-ChrAlju10 17286662 17287186 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1453 14 174 AP2-EREBP Transcription Factor Family AT1G71450 61.538 3.32e-64 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju10g1453 AP2 4.2e-13 CL0081