Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1446 ATGAGTTGCAGCTCCGGAGACAACAATGGAAGCAGTGGCAGCATCACAAACAGGGACAACGGCGCCGTCAGGTATAAGGGAGTCCGGCGAAGGAAATGGGGCAAGTGGGTGTCGGAGATTCGAGTTCCGGTGTCACAAGAGCGGCTTTGGTTGGGCACTTATGCGTCGCCGGAGGCGGCCGCGGTGGCTCACGACGTGGCTTACTACTGCCTGAGGAGACCGGCGACATTGGAGAAGCTAAACCTGCCGGAGATGTTGCCTTCTTGTTATGTCTGGCAGCAGCGGGAAATGTCGCCGAGGTCAGTGCAGGAGGCGGCGTCAAACGCCGGTATGGCGGTTGATGCGCAGAGGATTGTTGAAGCACAAGAGAAGAATCAGAAAACTGATGAACATAACAGAGGAAACAGAGATATGGATGATGGGTTTTGGTGGGACTGGAATAACGGTGACGAAAGTGGTGGCAGCGGCGGTGATGACGGCTGTTTATTGCAAGGAATCACCGGGGGTTGTACACAAGGAGGAGAAGCATCGAGCATTTCCGTTGATGATTATTTTGTCGATCATCAACATTATTAG 576 0.5347 MSCSSGDNNGSSGSITNRDNGAVRYKGVRRRKWGKWVSEIRVPVSQERLWLGTYASPEAAAVAHDVAYYCLRRPATLEKLNLPEMLPSCYVWQQREMSPRSVQEAASNAGMAVDAQRIVEAQEKNQKTDEHNRGNRDMDDGFWWDWNNGDESGGSGGDDGCLLQGITGGCTQGGEASSISVDDYFVDHQHY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1446 191 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Alju10g1446 191 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Alju10g1446 191 ProSiteProfiles AP2/ERF domain profile. 24 83 IPR001471 GO:0003700|GO:0006355
Alju10g1446 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 127 - -
Alju10g1446 191 Gene3D AP2/ERF domain 23 84 IPR036955 GO:0003700|GO:0006355
Alju10g1446 191 MobiDBLite consensus disorder prediction 122 149 - -
Alju10g1446 191 SUPERFAMILY DNA-binding domain 24 77 IPR016177 GO:0003677
Alju10g1446 191 CDD AP2 24 84 IPR001471 GO:0003700|GO:0006355
Alju10g1446 191 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Alju10g1446 191 MobiDBLite consensus disorder prediction 122 140 - -
Alju10g1446 191 SMART rav1_2 24 89 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1446 Alju-ChrAlju10 17125389 17125964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1446 24 115 AP2-EREBP Transcription Factor Family AT1G22810 61.957 1.36e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju10g1446 AP2 2.2e-10 CL0081