Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1441 ATGGGGTGCCTCTGCTCAAAAGACAAGAATGAAGTTGATGAATGTGATAAAGAAGAAGACTTAGCCAAGTCTTCATCAGTACAACTGGTCCCTCCTGCTCTCTCAACAGCCCAGTTGGGTGGTGGTGCGGACACTGATGGCTCGGTGAATAGGCTGCTTAAGAAATATTCACATACAAATGTAAACAACCATAATGTAGTTGATGCAAAACTGATAAAAGGTCAACATCAGAGACCTGCATCGTTTGATGCTAGTGTTGGGGAAGGGAAGGGATGGATGTCTCGAATACTTAGCATGTCAAAGGGTTCAGAAGCAGAACATGTTGCTGCAGGATGGCCATTGTGGTTATCTTCAGTAGCAGGAGATGCCATCAAAGGGTGGGTTCCTCGACGGCTAGACTCTTTCGAGAAGTTAGGCCAAGTGGGGCAAGGCGCTTATAGCAGTGTACATAAGGCTCTTGATTTACTTACTGGTAAAATTGTGGCATTGAAGAAAGTGCGTTTTTCACCTTCAGATGCTGAAAGTGTTCGGTTTATGGCTAGGGAAATCTATATTTTGCGCCAACTTGACCATCCAAATATCATGAAGCTTGAGGGTATTGTGACGTCAAGGACGTCCAGCAACTTGTATCTTGTCTTCGACTACATGGAACATGACCTTGCTGGGCTAGAAGCGTTGCCCGGGATGAAGTTCACTGAATCTCAGATAAAATGTTATATGAAGCAATTGCTTTGTGGGCTTGAACACTGCCATAGTCGTGGTGTACTACACCGTGACATCAAGGGTTCAAATCTGCTGCTTAACAGTGAGGGAATTCTTCAGATTGGGGACTTTGGTCTTTCAACTATTTACCATACTGATAATGATAACAAGGAGCCATTGACTAGCCGTGTCGTGACTCTGTGGTATAGGCCGCCTGAGCTTTTACTTGGTGCTACAGATTATGGACCCGCAGTTGACTTGTGGAGTGCTGGTTGCATTCTAGCAGAATTACTTGTTGGGAAACCTATTATGCCAGGAAGAACAGAAGTTGAACAAATGCACAAGATTTTTAAGCTTTGTGGTTCCCCAAGTGAAGAGTTTTGGAGGAAAACAAAATTGCCCCATGCAACAAGTTTTAAACCTCAGAGACAATACAGACGCCGTGTTTCTGAAACATTTAAAGACTTTTCTCCTTCAGCCCTGGCTCTTGTCGAAAAGCTCCTTGCAATAGAACCAGAAGATCGAGGCTCAGCAACTTCTGCTCTTCAGAGTGAGTTCTTCACAACACCGCCCCTACCTTGTGATCCATCAAGTTTACCGAAGTTTCCTCCTAGCAAGGAGTATGATGCCAAGCTTAGAGATGAGGAAGCAAGAAGGAAAAACACTGAAGCTGGAAAAAGACATGAACCAGTATCTGTTGCAAGAGGTGCAAGAGATACAAATGCTCTCGGATCACCAGAGTATAACGCTAAAGGAAATATATCTGTACAGGTTAGTTCAAATGCAAAAACGTCTAGTGGTAAATATACCTCCAGTGAGGATGGTAGTTCCCACTTTAGGATTGTGCCAGCCAGAGGTTCTGGACAAAACAGTCATGATCGTCCTACTTGGGGGAAGCAAATCACTGCAACGGGATCACCATTGAATAAGAGATCAGACTCCAGGGAGAAGAATAAAGAGTTAAGGACACAGAGATCTAATGTAAACCAGGCAGCTGCAGATTTTTCCAACTCTTATATAAACAAGGGTTACATGCCCAAGAAAAATAGGATGCACCACTCTGGACCATTGGTGCCTCCGGGAGCTAACATCGATGACATGCTCCGAGAGCACGAGAGATTAATGCAGGAGACATTCCGTACTGTCAAGGACAAGAACAACCATAAAAAATACCTGTAA 1881 0.4407 MGCLCSKDKNEVDECDKEEDLAKSSSVQLVPPALSTAQLGGGADTDGSVNRLLKKYSHTNVNNHNVVDAKLIKGQHQRPASFDASVGEGKGWMSRILSMSKGSEAEHVAAGWPLWLSSVAGDAIKGWVPRRLDSFEKLGQVGQGAYSSVHKALDLLTGKIVALKKVRFSPSDAESVRFMAREIYILRQLDHPNIMKLEGIVTSRTSSNLYLVFDYMEHDLAGLEALPGMKFTESQIKCYMKQLLCGLEHCHSRGVLHRDIKGSNLLLNSEGILQIGDFGLSTIYHTDNDNKEPLTSRVVTLWYRPPELLLGATDYGPAVDLWSAGCILAELLVGKPIMPGRTEVEQMHKIFKLCGSPSEEFWRKTKLPHATSFKPQRQYRRRVSETFKDFSPSALALVEKLLAIEPEDRGSATSALQSEFFTTPPLPCDPSSLPKFPPSKEYDAKLRDEEARRKNTEAGKRHEPVSVARGARDTNALGSPEYNAKGNISVQVSSNAKTSSGKYTSSEDGSSHFRIVPARGSGQNSHDRPTWGKQITATGSPLNKRSDSREKNKELRTQRSNVNQAAADFSNSYINKGYMPKKNRMHHSGPLVPPGANIDDMLREHERLMQETFRTVKDKNNHKKYL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1441 626 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Alju10g1441 626 CDD STKc_CDK9_like 135 421 - -
Alju10g1441 626 SMART serkin_6 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1441 626 MobiDBLite consensus disorder prediction 480 511 - -
Alju10g1441 626 Gene3D Transferase(Phosphotransferase) domain 1 223 461 - -
Alju10g1441 626 SUPERFAMILY Protein kinase-like (PK-like) 128 429 IPR011009 -
Alju10g1441 626 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Alju10g1441 626 Pfam Protein kinase domain 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1441 626 PANTHER CELL DIVISION PROTEIN KINASE 133 427 - -
Alju10g1441 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Alju10g1441 626 FunFam probable serine/threonine-protein kinase At1g54610 218 461 - -
Alju10g1441 626 Gene3D Phosphorylase Kinase; domain 1 129 222 - -
Alju10g1441 626 MobiDBLite consensus disorder prediction 423 562 - -
Alju10g1441 626 MobiDBLite consensus disorder prediction 523 543 - -
Alju10g1441 626 MobiDBLite consensus disorder prediction 440 468 - -
Alju10g1441 626 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1441 Alju-ChrAlju10 17034330 17038765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1441 127 469 Core Cell Cycle Gene Families AT5G10270 50.689 4.93e-118 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju10g1441 Pkinase 2.8e-67 CL0016