Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1413 ATGGATCCGTTTGATGATTTTTTATCAGAAGCTCCTGTTTCACGTGCTAGGGTGGGTGGCAGGTTTATTCCAAAGGCCAAGGCTAAACAGCCGGCTGGAAAGGAGATATCCACATCAAATGAAGCAGCCTCATCTAATGATGGAAAGAATGAGCATGTTGTTTCATCATCCATGAGCTTGGACACCGTAGGAAATGTTCCAACAAAAAGTAGTAATCCAGTTGATTCAACTCCAGATAAATCAGCTACAGAATTTCTGAAATCTAGTCATAGTTCACCAGTAGAAATCCCAGTTTTGGATAGTAATAATCCTGACCTGGAGAGTTCTCAACAAATTAATGTGAGTGGATGCAATGCAGTATTGGTGGAAGCTCAGCCTTCAATTATTGCAGCATCTGAGGTCAATAGTCATTGGTCTACCAATTTTCCAAAAACAGCTAATGGGGCAGATCCTGTTGGTTTTGATGTGGGTCTTGTAGTTGACACTGTTCCTGAGACCGACCTCCATAATGCTCAAGCAGATCTGTTTAGAAATGTGATTGATCCATCTGCACCTAACTCAACCATTATTGAGAATGAACAACCTTCTAAATACCGGGAAGGTGAAGGTTCATTTCTTGATGCCAACAAAAGCTTGGAACCTGTTGATTCCTTGCTGCAAGTTGGTCCTGATGTGGAATCCCAAAGTGCTTCAGATTGTAAAGTTGCAATGATGGAGACAAGTCATTCAAATTCTAACCTTGAGAGAGCAGGAGAGGTAGAGTCTGCTGAAGTTGAATTGGATCCTTTCAGAGACACTCTCCCTGATCCTGGTCTTAGGAATGCTCGCAAGTTTCAACCTAAGATTAAGCCTCGGCCTAGACTAGGGACTGCAGCGGTTGTTGCTTCTGCTTCATCTAATGATATGCTTGGGACAATTAACACATTAAGTGATACTGATAATTCATGCTTGAGGGTGCCATTGTCTGAGGACAAAAGCAGCTTGGGTACGGTAATCTCTTCTAGATCAGAGCCTTCTACTGCCATGCTTTCAGAGGTTTCTGTTCACAATGAGCCTAGAGATTGGCCTTCTAACAGTGGAAAGCCAGCGGGAGAGACTACAGACATATTTTCTGTGTTGGAGACTTTCAGCCTTGATGACTTTCTCACACAAGATGGCTCTAGTGCAGGAAATCCAACTCTTCATTCTTTCCATGAGAAGGGACAAGAGGATTTTGTCAGCCAGCCATGTGATATATCCCAAATTCAAAAGTTTCCTAACTATATGACCACTCACGATTCATTGACCTTCAAGGAAGATGCAGTCCTCAATGAGGATGATTCTCACACTGAGAATGGAGGGTTGGCAGCAGAGGAAGTAGGAGGATCAATGCCTGCCCACCCTCTTGATGATACCCTTGATTATTCATCTATGAATAATGGCTCAGATCCAACTTTTCCAGTGTGCGAAGAACCACTTGAAGAACCGACAAATACAGCAAATAATCCTACTTATGATGACCTTTTGCATGTAGAAGATGTTCCTGGAGGAAAAGATGATGGTGGCTATAAAGAAAAAGATGCCACGATGTCCAGTTCACCAAAAAATCGTACAGATTCTTCTGTAGTAGGTGAGACAGATAAAGTTGATAGACCTCAGAGGCAGGGGAGAAAGCGAGTTAATCTTAAACATGTCGATGCAGTGGAGAACGAGGATCCTGAGGAGGAAGATGAACTTGACGCTACTTACTCTAACATTGATGATGAACTTGAAGAACATGATGATGAATATGGATTGAATAATGGATGCATGAAGAAAAAGAAGAAATCTGTAACAAAAAATACAAAACCACGTCAAAAGCGTAAAAGGGCCAATGAAGATTTAGATAAAGCTACTAAAGAACCTCATAAAAAATTCTCTCATTCAACCCAACGAAGAAAAAGACGTGTGGATAAGGCTTTGCTGGAAATTCCTGAGGATGAACTTAATCCTCAAACATTACGCATCAAGGATATTATACTGCTTGCAGAATATAGAGAGCGACAAGCGAAAAAGGAGGCAGCAGCATCAAAAACATCTTCGATTAATGGAAGAGATGGAGACTCACTTCATAAGGATTCTGCTCATAATGAAGACATGTTAGGTTCAGAATATGGAAGAGGCTCAGATGATGATCAAGCTAATGAAAACGTTCCATTAGCTCCCACTTTATTCAATTACCAGTCTTTCATGGACAAAAAACCTAGAGGAAAATGGTCGAAACAAGACACAGAACTGTTCTATGGGGCTGTTCGCCAGTTTGGCACAGATTTTTCTATGATACAACAACTTTTCCCTGGTCGAACACGTCATCAAATTAAGTTGAAGTACAAACAGGAAGAACGTCAACGTCCTTTACTCCTATCTGATGCTATAAATAACCGCACAAAAGATCTTTCTCATTTTAAAACAGTTTTTGAGCAGCTGCAACAAGCTTCTGCTAAGACAGAACAAGACACTACCGACACCTCAGTTGGCATGACAGAGGAGTTGGTGGACTTGACATCCGAGCCTAATCCTAATGAAGGGAAAGATGCAAAACCTGAGCAGGACGAAGCTGTGCAAGATCATCAGGAAGATAATGGGCCATCTCATAGTGCTGAGAAATCTGATGAAAATGATAATGATGACGATGATGACGATGACTTCCAAAGATGTGGCGTGACAGTCACCCTCAGCGGTGCTACATCGTGGGTTTCATCCTATCTGATACCTAAGTATTCAAAAGCTAGTTCTAGATGA 2760 0.4159 MDPFDDFLSEAPVSRARVGGRFIPKAKAKQPAGKEISTSNEAASSNDGKNEHVVSSSMSLDTVGNVPTKSSNPVDSTPDKSATEFLKSSHSSPVEIPVLDSNNPDLESSQQINVSGCNAVLVEAQPSIIAASEVNSHWSTNFPKTANGADPVGFDVGLVVDTVPETDLHNAQADLFRNVIDPSAPNSTIIENEQPSKYREGEGSFLDANKSLEPVDSLLQVGPDVESQSASDCKVAMMETSHSNSNLERAGEVESAEVELDPFRDTLPDPGLRNARKFQPKIKPRPRLGTAAVVASASSNDMLGTINTLSDTDNSCLRVPLSEDKSSLGTVISSRSEPSTAMLSEVSVHNEPRDWPSNSGKPAGETTDIFSVLETFSLDDFLTQDGSSAGNPTLHSFHEKGQEDFVSQPCDISQIQKFPNYMTTHDSLTFKEDAVLNEDDSHTENGGLAAEEVGGSMPAHPLDDTLDYSSMNNGSDPTFPVCEEPLEEPTNTANNPTYDDLLHVEDVPGGKDDGGYKEKDATMSSSPKNRTDSSVVGETDKVDRPQRQGRKRVNLKHVDAVENEDPEEEDELDATYSNIDDELEEHDDEYGLNNGCMKKKKKSVTKNTKPRQKRKRANEDLDKATKEPHKKFSHSTQRRKRRVDKALLEIPEDELNPQTLRIKDIILLAEYRERQAKKEAAASKTSSINGRDGDSLHKDSAHNEDMLGSEYGRGSDDDQANENVPLAPTLFNYQSFMDKKPRGKWSKQDTELFYGAVRQFGTDFSMIQQLFPGRTRHQIKLKYKQEERQRPLLLSDAINNRTKDLSHFKTVFEQLQQASAKTEQDTTDTSVGMTEELVDLTSEPNPNEGKDAKPEQDEAVQDHQEDNGPSHSAEKSDENDNDDDDDDDFQRCGVTVTLSGATSWVSSYLIPKYSKASSR 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1413 919 Gene3D - 745 810 - -
Alju10g1413 919 ProSiteProfiles SANT domain profile. 740 791 IPR017884 -
Alju10g1413 919 Pfam Myb DNA-binding like 735 819 IPR039467 -
Alju10g1413 919 MobiDBLite consensus disorder prediction 504 525 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 534 562 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 328 364 - -
Alju10g1413 919 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 737 791 IPR017930 -
Alju10g1413 919 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 274 885 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 846 877 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 438 640 - -
Alju10g1413 919 Coils Coil 569 589 - -
Alju10g1413 919 SUPERFAMILY Homeodomain-like 743 790 IPR009057 -
Alju10g1413 919 MobiDBLite consensus disorder prediction 613 631 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 839 892 - -
Alju10g1413 919 SMART sant 741 789 IPR001005 -
Alju10g1413 919 MobiDBLite consensus disorder prediction 1 95 - -
Alju10g1413 919 CDD SANT 744 785 IPR001005 -
Alju10g1413 919 MobiDBLite consensus disorder prediction 691 717 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 33 95 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 242 277 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 678 723 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 252 266 - -
Alju10g1413 919 MobiDBLite consensus disorder prediction 563 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1413 Alju-ChrAlju10 16579971 16586810 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju10g1413 Myb_DNA-bind_7 9e-29 CL0123