Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1409 ATGGTTTTTCTGTCAACTTCCAAGATCAGCTTGGTACTTCTTCTCAACATGGGTTTAGTCATTATGTGTCTTTTATGGCAATTAACAAAGAAGGTGTTCCTTGGCACACTCCGAGAGGCAGAGGTTGAGAGGCTTAATGAGCAATCATGGAGGGAGGTTATGGAAATTCTCTTTGCCATCACCATTTTTAGGCAGGATTTCTCTGTTACATTCCTTGCTATGGTCACAGCACTGTTGTTGATCAAAGCTTTGCATTGGTTGGCCCAGAAAAGAGTTGAATATATTGAGACCACTCCTACCGTGCCCTTGTTGTCTCACATTCGAATTGTGTCTTTTATGGTTTTCCTCCTTCTTCTTGATGGACTCTTTCTATATAGTTCCATGAAACAATTGATACAATCTTGGCAGGCTTCAGTTTCCCTCTTTTTTGCTTTCGAGTACATGATTCTGGCAACAACAACAGTGTCAATTTTTGTAAAATACCTTTTCTACGTCAGTGACATGCTTATGGATGGACAATGGGAGAAGAAACCAGTCTTCACATTCTACTTGGAACTCATTAGGGATTTGCTTCACTTGTCTATGTATATGTGTTTCTTCCTTGTAATTTTCGTAAATTATGGTGTGCCTTTGCACTTAATAAGGGAGCTGTATGAGACATTTAGGAACTTCAAAGTTCGTGTTGCTGACTACATACGTTATCGTAAGATCACTTCAAATATGAATGATCGGTTTCCAGATGCAAACCCAGAAGAACTTAATGCAAGCGATCCTACATGTATTATCTGTCGTGAAGAGATGACTACAGCCAAGAAACTTGTATGCGGACATTTTTTTCATGTTCATTGCCTCCGGTCATGGTTGGAGCGACAAAATACTTGCCCTATCTGCAGAGCCTTGGTTGTACCACCTGAAAATGGGGCAACAACTGCTGGAGGGCAGCATGGATCACAGTCAGATCGACAGGACCGACAGGGAACAGGAACAGGAACAGGAACTGGAACAAGTACTGGAAGCTCAGCTCAAGCTGAAGCTGGCAGTGGGGCGGCTACTGATAATTTAAGTTGTCATCAAGCTAGACTTCGAGCTTTAGCTGCCGCTGCTTCAATGTATGAGAAGTCTTTCGTATACCCATCTGCACCTTCTTTAGCATGTGCCCCTGGATACACTGTTTATCCTCCTGTTCAAAGACCCGCAACTGAATCTTCTAATACGGAACGGCATACTTCAAGCGAACAAACACAACGACAGGTTGTCACCCCTTTTGGACCAATGAATATTTCCTTTCATCCAATGGGACCGTTTCTTTTTCCTCCTCCAACACATGTAGCTGATGGGAATTATGGAGAGGGATCTGGATCTGATCCAAATGCGCCAAACCCTCTGCTGGAAGCTCAAAGGATTCAACACCAGATTGAGGTTCTGCAACATCAGCTCCAGATTCTGAAGGCAAGTGTTGAGGAAAATGTAAATGAGGGCAAGCCATCATCAAGTAGCAAAGGTAAGCAGGTTGCTTCTTCTTCTGTGTCTGATAATGGCCGTAATGAAGAAATTCAAGAAATTCAAGGCGGCAGTGTATAA 1581 0.4282 MVFLSTSKISLVLLLNMGLVIMCLLWQLTKKVFLGTLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMVFLLLLDGLFLYSSMKQLIQSWQASVSLFFAFEYMILATTTVSIFVKYLFYVSDMLMDGQWEKKPVFTFYLELIRDLLHLSMYMCFFLVIFVNYGVPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDANPEELNASDPTCIICREEMTTAKKLVCGHFFHVHCLRSWLERQNTCPICRALVVPPENGATTAGGQHGSQSDRQDRQGTGTGTGTGTSTGSSAQAEAGSGAATDNLSCHQARLRALAAAASMYEKSFVYPSAPSLACAPGYTVYPPVQRPATESSNTERHTSSEQTQRQVVTPFGPMNISFHPMGPFLFPPPTHVADGNYGEGSGSDPNAPNPLLEAQRIQHQIEVLQHQLQILKASVEENVNEGKPSSSSKGKQVASSSVSDNGRNEEIQEIQGGSV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1409 526 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 232 305 IPR013083 -
Alju10g1409 526 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 232 307 - -
Alju10g1409 526 MobiDBLite consensus disorder prediction 440 461 - -
Alju10g1409 526 MobiDBLite consensus disorder prediction 396 417 - -
Alju10g1409 526 Coils Coil 465 492 - -
Alju10g1409 526 SUPERFAMILY RING/U-box 240 304 - -
Alju10g1409 526 PANTHER RING ZINC FINGER PROTEIN 1 484 - -
Alju10g1409 526 MobiDBLite consensus disorder prediction 486 526 - -
Alju10g1409 526 MobiDBLite consensus disorder prediction 308 346 - -
Alju10g1409 526 ProSiteProfiles Zinc finger RING-type profile. 260 298 IPR001841 -
Alju10g1409 526 SMART ring_2 260 297 IPR001841 -
Alju10g1409 526 MobiDBLite consensus disorder prediction 310 346 - -
Alju10g1409 526 CDD RING-H2_synoviolin 257 298 - -
Alju10g1409 526 Pfam Ring finger domain 259 298 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1409 2 508 C3H Transcription Factor Family AT3G16090 61.886 0.0 593