Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1366 ATGGACCACCAGGGTGTGGGAAAACCACTCTGGCTCTTGCAAATAGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCGGGGCGATTTGATCTTGAAATTTTTCTTGGTGTTCCTGATGAATATGCCAGGGAGGAGATCTTGTCTGTGCTTACTCGCAATCTAACTCTGGAGGGCTCATTTGATCTTAGAAAAACAGACAGGTCTACCCCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTAGCTGACAAGGCTGGTAACCTAGCAATGAAAAGAATTATTCATGAAAGGAAACGTGAATTATCCCAAGATGTTTTAGATGAGCATGGTGAAGATTGGTGGAGGGAACCTTGGTTACCAGAAGAGATGGATATGCTTGTCATCAAAATGTCAGATTTCGAGGAAGCAGTCAAATTGGTTCAACCTTCATCAAGAAGAGAAGGGTTTTCTTCCATTCCTAATGTAAAATGGGAAGATATTAATCTTGAGGCGGGATTTTTGCTCTATGGACCACTAAGATATGGTAAAACACTGATTGCAAAAGTTATTGCCAATGAAGCAGGGGCTAATTTTATTCATATCCAGGGCCCTGAACTTCTAAATAAATATGTTGGAGAAAGCAAGCTAGCAGTACGGACATTGTTTAGTCGTGTAAGAACATGTTCACCTTGCATTCTGTTTTTTGATGAGGTGGATGCACTGACAACCAAACATGGTAAGGAAGGTGGATGGATTGTTGAGCGACTACCTAAGGTGATGGACCGTGCGGTCCTTCGGCCTGGTAGGTTAGGTAAACTTCTGTATGTTCCTCTGCCAAGCTCAGATGAACGAGGCTTGATCTTAAAAGCTCTTGCAAGGAAGAAGCTAATTGATGACAGCGCAGATTTGTGTGCCTTTGAAAAAATGGAAGCTTGTGAAAATCTCAGCGGTGTTGATCTTGCTGCATTGTGGAATGAAGTAGCGCTGGCTGCTACTAAAGAGAAGTTGGCATCAAAAGAGAGAACTTCATATGCATTGACCATCAAGTTCAACCATTTTGAGACTACTCTCACTAAAGTCTCTCCCTCAGTGTCAGATGTGCGCAGGGGAAATACAGAGTTTTCTTCCCACTTCCCAGGCGACATTGCCTTCCGGTTCTGCTCCTGCGTTGTATTCAGAGCCTCGCGCCTACACAGGTTGAATTGGTGCTTTACAGAATCAACAAAGATGGGAAGGAGAAATGGAGGAAGGTCACTGTATGAAATTCTTCGTCGTCGTCTTGAGTCCTGCAAATCCAGGTACTCAACTGTTGATGAAATTGTAAACCATCTTCGAGCAAATTACCCTGATTACCAGCGAACAAAACAACAAACTTTGACTAGATTTGTTCAAGAAGCTTTGGAGTCGTCTAAGCGTGGGAACAAGCAGTTGAGCAGAAAGCCCAATGCTCCTATATTGAAGCCTGATAGATCAGAAGAAGATGAAGAAGAAGAAGGTCGAAGTGCATCTCGAAAGAGGCGCAAGAAAGTTGATGAAAGTGAAGAAAGATTGCAAAACATGGAGAGTTTACACCTTCAAAGGTTACAAAGGGATTGGAGCCGCTGTTTATCAACCTCTTCTGCCTCGACTTCTGGTCCGTCATCGCCTGAAGAGAGTGATGACGAAGATGGGACTGTGTCTACATCAGAGGATCCAATTTATGAGGAGAAAGTGGAACCAGCCTTTGACTTGATGAAAACAATGTTGCGGGCTTCATACTCAGGAACAAAGAATGTGAAATGTACAGCAGAGGAGAAAAACGTTGAACTGGAGGCGACTAATAATAAGAAGGCAACTAAGATTGATGCTATGAATGGAGTTGGAGGTAACATGAAAGATGATTTGGAACCAAAAAGGCAATTGAGGGGTTCAGTTTCAAATGGCAATGGTGATGTTGAGGTCAAGGGGAAGGGTGGCCCTAGATTCAAAGATTTGGGTGGGATGGAGAAGGTGCTGGAGGAATTGAAGATGGAAGTAATTGTTCCTCTTTATCATCCACAGTTACCAAGAAAGTTAGGTGTGAGGCCAATGGCAGGGATTTTGTTACATGGACCCCCAGGGTGTGGGAAAACCACTCTGGCTCTTGCTATAGCTAATGAGACTGGTTTTCCGTTCTATCAGATATCAGCTACAGAAGTGGTTTCTGGAGTTTCAGGAGCGTCTGAAGAAAACATTAGGGAGCTTTTTTCTAAAGCATACAGGACTGCCCCATCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAACGTGAGATGGAGAAACGAATTGTGACACAATTAATGACTTCAATGGATCAATCGAGCAGGCTCTTTCAACCTGCTGATAGTTCAGAAAGTTCTGATGCTTGTCCTGGCTATGTTCTTGTTATCGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCCGGGCGGTTTGATCGTGAAATTTTCCTTGGTGTTCCTGATGAATATGCCAGGGAGGAGATCTTGTCTGTGCTTACTCGCAATCTAACTCTGGAGGGCTCATTTGATCTTAGAAAAATTGCCAGGTCTACTCCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTAGCTGACAAGGCTGGTAACCTAGCAATGAAAAGAATTATTCATGAAAGGAAACGTGAATTATCCCAAGATGTTTTAGATGAGCATGGTGAAGATTGGTGGAGGGAACCTTGGTTACCAGAAGAGATGGATAAGCTTGTCATCAAAATGTCAGATTTCGAGGAAGCAGTCAAATTGGTTCAACCTTCATCAAGAAGAGAAGGGTTTTCTTCCATTCCTAATATAAAATGGGAAGATATTGGTGGGCTTGATTTTCTAAGACAAGAGTTTGAGCGTTATATTGTTAGACGCATAAAGTATCCAGATGATTATAAGGAATTTGGGGTGGACCTTGAGACAGGATTTTTGCTCTATGGACCACCAGGGTGTGGTAAAACACTGATAGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTTATTCATATCAAGGGCCCTGAACTTCTAAATAAATATGTTGGAGAAAGTGAGCTAGCAGTACGGACATTGTTTAGTCGTGCAAGAACATGTTCACCTTGCATTCTTTTTTTTGATGAGGTGGATGCACTAACAACCAAACGTGGTAAAGAAGGTGGATGGATTGTTGAGCGACTGTTGAACCAGTTACTTATTGAGTTAGACGGTGCAGAGCAAAGGCAAGGTGTTTTTGTTATTGGGGCCACTAACAGACCTGAGGTGATGGACCGTGCGGTCCTTCGGCCTGGTAGGTTTGGTAAACTTCTGTATGTTCCTCTGCCAAGCTCAGATGAACGAGGTTTGATCTTAAAAGCTCTTGCAAGGAAGAAGCCAATTGATGAAAGCGTGGATTTGTGTGCCCTTGGAAGAATGGAAGCTTGTGAAAATCTGAGCGGTGCTGATCTTGCTGCATTGATGAATGAAGCAGCGCTGACTGCTGCTGAACAGAAGTCCGCATCAACAGAGAGAACTTTGGATATATTGACCATCAAGTTCAGCCATTTTGAGACTGCTCTGACTAAAATCTCTCCTTCGGTGTCAAACGCGCAAAAACAATACTATCAGCGGTTAGCAGAGACTTTTAAGGCTGCATGA 3678 0.4342 MDHQGVGKPLWLLQIGATNRPDAVDPALRRPGRFDLEIFLGVPDEYAREEILSVLTRNLTLEGSFDLRKTDRSTPGFVGADLAALADKAGNLAMKRIIHERKRELSQDVLDEHGEDWWREPWLPEEMDMLVIKMSDFEEAVKLVQPSSRREGFSSIPNVKWEDINLEAGFLLYGPLRYGKTLIAKVIANEAGANFIHIQGPELLNKYVGESKLAVRTLFSRVRTCSPCILFFDEVDALTTKHGKEGGWIVERLPKVMDRAVLRPGRLGKLLYVPLPSSDERGLILKALARKKLIDDSADLCAFEKMEACENLSGVDLAALWNEVALAATKEKLASKERTSYALTIKFNHFETTLTKVSPSVSDVRRGNTEFSSHFPGDIAFRFCSCVVFRASRLHRLNWCFTESTKMGRRNGGRSLYEILRRRLESCKSRYSTVDEIVNHLRANYPDYQRTKQQTLTRFVQEALESSKRGNKQLSRKPNAPILKPDRSEEDEEEEGRSASRKRRKKVDESEERLQNMESLHLQRLQRDWSRCLSTSSASTSGPSSPEESDDEDGTVSTSEDPIYEEKVEPAFDLMKTMLRASYSGTKNVKCTAEEKNVELEATNNKKATKIDAMNGVGGNMKDDLEPKRQLRGSVSNGNGDVEVKGKGGPRFKDLGGMEKVLEELKMEVIVPLYHPQLPRKLGVRPMAGILLHGPPGCGKTTLALAIANETGFPFYQISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDQSSRLFQPADSSESSDACPGYVLVIGATNRPDAVDPALRRPGRFDREIFLGVPDEYAREEILSVLTRNLTLEGSFDLRKIARSTPGFVGADLAALADKAGNLAMKRIIHERKRELSQDVLDEHGEDWWREPWLPEEMDKLVIKMSDFEEAVKLVQPSSRREGFSSIPNIKWEDIGGLDFLRQEFERYIVRRIKYPDDYKEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWIVERLLNQLLIELDGAEQRQGVFVIGATNRPEVMDRAVLRPGRFGKLLYVPLPSSDERGLILKALARKKPIDESVDLCALGRMEACENLSGADLAALMNEAALTAAEQKSASTERTLDILTIKFSHFETALTKISPSVSNAQKQYYQRLAETFKAA 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1366 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 651 942 IPR027417 -
Alju10g1366 1225 SMART AAA_5 987 1123 IPR003593 GO:0016887
Alju10g1366 1225 SMART AAA_5 686 836 IPR003593 GO:0016887
Alju10g1366 1225 SMART AAA_5 166 277 IPR003593 GO:0016887
Alju10g1366 1225 MobiDBLite consensus disorder prediction 463 568 - -
Alju10g1366 1225 Pfam ATPase family associated with various cellular activities (AAA) 171 260 IPR003959 GO:0005524|GO:0016887
Alju10g1366 1225 Pfam ATPase family associated with various cellular activities (AAA) 992 1120 IPR003959 GO:0005524|GO:0016887
Alju10g1366 1225 Pfam ATPase family associated with various cellular activities (AAA) 690 833 IPR003959 GO:0005524|GO:0016887
Alju10g1366 1225 Gene3D - 3 43 IPR027417 -
Alju10g1366 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 362 IPR027417 -
Alju10g1366 1225 ProSitePatterns AAA-protein family signature. 1091 1109 IPR003960 GO:0005524|GO:0016887
Alju10g1366 1225 MobiDBLite consensus disorder prediction 519 545 - -
Alju10g1366 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 152 IPR027417 -
Alju10g1366 1225 Gene3D - 644 833 IPR027417 -
Alju10g1366 1225 PANTHER AAA-FAMILY ATPASE 254 365 - -
Alju10g1366 1225 MobiDBLite consensus disorder prediction 482 518 - -
Alju10g1366 1225 FunFam Cell division control protein 48 homolog C 43 151 - -
Alju10g1366 1225 CDD RecA-like_NVL_r2-like 959 1119 - -
Alju10g1366 1225 ProSitePatterns AAA-protein family signature. 804 822 IPR003960 GO:0005524|GO:0016887
Alju10g1366 1225 FunFam Ribosome biogenesis ATPase RIX7 641 833 - -
Alju10g1366 1225 Gene3D - 1122 1201 - -
Alju10g1366 1225 Gene3D - 835 943 - -
Alju10g1366 1225 Gene3D - 44 151 - -
Alju10g1366 1225 Gene3D - 153 274 IPR027417 -
Alju10g1366 1225 FunFam ATPase, AAA family protein 949 1127 - -
Alju10g1366 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 949 1222 IPR027417 -
Alju10g1366 1225 Gene3D - 276 365 - -
Alju10g1366 1225 MobiDBLite consensus disorder prediction 631 650 - -
Alju10g1366 1225 FunFam Cell division control protein 48 homolog C 835 943 - -
Alju10g1366 1225 Pfam AAA+ lid domain 1144 1196 IPR041569 -
Alju10g1366 1225 Pfam AAA+ lid domain 73 100 IPR041569 -
Alju10g1366 1225 Pfam AAA+ lid domain 857 892 IPR041569 -
Alju10g1366 1225 Gene3D - 949 1215 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1366 Alju-ChrAlju10 15751727 15765315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1366 5 96 Calmodulin-binding Proteins AT3G56690 40.860 8.10e-15 77.8