Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju10g1224 | ATGAGCAAGTCTCTGCTTTTAGGCTTTTACATCACAGTTTCCTGCATCGCTTTTGTCATTTCCAAGATCATTATCTCAGTCCTGCTCTACAAAAGATGGAAAAGAAAGCACATGATTCAGGAAGAAGGCTATGCAGGTGGGAAGATGGTGATATTTAGGTCTTCGGTTCTGCAATCCCTCGAATCTGATACGAAGTTGAAGAAGATATTGAGCTTGAATGATATGGAGGTGATTGGGTGTGGTGGTTATGGGACGGTTTATAAACTGAAAATAGATGACTCAAAAGCTTTTGCAGTGAAAAGACTGAACAGAGGAACTGCAGATAAAGGATTTGAGAGGGAGCTGGAAGCAATGGCAGACATAAAACACCGCAATATTGTAACTCTTCATGGATATTATACTGCTCCACATTACAACCTCCTCATATATGAATTGATGCCTAATGGAAGTTTGGATAATTTCCTCTGCAGAAGAGCAGAGCAGAAGAAAACTTTAAATTGGTCAGCAAGATACAGAATAGCTATAGGTGCTGCTAGAGGAATATCTTATCTTCACCATGATTGTATCCCTCACATAATCCACAGAGATATCAAGTCAAGCAATATATTGCTTGATGAAAACATGGAGGCTCAAGTTTCCGATTTTGGATTAGCCACGTTGATGGAACCGGACAAAACCCATGTTTCCACAATTGTGGCTGGAACTTTTGGATACTTAGCTCCTGAATATTTTGATACAGGAAGAGCAACATTCAAGGGGGATGTCTACAGCTATGGAGTTGTACTACTGGAGCTTTTAACTGGGAGAAAACCCAGTGATGAAACATTTGCAGAAGAAGGAACGAAGCTTGTCACATGGGTGAAGGCTGTTGTTCAGGAAAAGAAGGAGGAACTAGTTCTTGATGATAGGCTAGGGACCTGTCCAATGCAAGAAGTGAACAATGTGTTCAATATTGCCATGATGTGTCTTGAATCTGATCCCTTGAAGAGGCCAACAATGGAAGAAGTTGTCAACTTGCTTGAGCAAACGAAGCCGGACAAACTTGCTACAGCTTCCTGA | 1059 | 0.4117 | MSKSLLLGFYITVSCIAFVISKIIISVLLYKRWKRKHMIQEEGYAGGKMVIFRSSVLQSLESDTKLKKILSLNDMEVIGCGGYGTVYKLKIDDSKAFAVKRLNRGTADKGFERELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMPNGSLDNFLCRRAEQKKTLNWSARYRIAIGAARGISYLHHDCIPHIIHRDIKSSNILLDENMEAQVSDFGLATLMEPDKTHVSTIVAGTFGYLAPEYFDTGRATFKGDVYSYGVVLLELLTGRKPSDETFAEEGTKLVTWVKAVVQEKKEELVLDDRLGTCPMQEVNNVFNIAMMCLESDPLKRPTMEEVVNLLEQTKPDKLATAS | 352 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju10g1224 | 352 | FunFam | Receptor-like serine/threonine-protein kinase | 43 | 145 | - | - | |
| Alju10g1224 | 352 | ProSitePatterns | Protein kinases ATP-binding region signature. | 78 | 100 | IPR017441 | GO:0005524 | |
| Alju10g1224 | 352 | SUPERFAMILY | Protein kinase-like (PK-like) | 72 | 342 | IPR011009 | - | |
| Alju10g1224 | 352 | Gene3D | Transferase(Phosphotransferase) domain 1 | 146 | 350 | - | - | |
| Alju10g1224 | 352 | Gene3D | Phosphorylase Kinase; domain 1 | 54 | 145 | - | - | |
| Alju10g1224 | 352 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 146 | 351 | - | - | |
| Alju10g1224 | 352 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 11 | 344 | - | - | |
| Alju10g1224 | 352 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 192 | 204 | IPR008271 | GO:0004672|GO:0006468 | |
| Alju10g1224 | 352 | Pfam | Protein kinase domain | 74 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju10g1224 | 352 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 15 | - | - | |
| Alju10g1224 | 352 | ProSiteProfiles | Protein kinase domain profile. | 72 | 344 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju10g1224 | 352 | SMART | serkin_6 | 72 | 340 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju10g1224 | Alju-ChrAlju10 | 13225146 | 13227851 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju10g1224 | 3 | 342 | Receptor kinase-like Gene Family | AT2G35620 | 47.399 | 2.79e-102 | 311 |
Transcription factors information