Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1219 ATGCAGCAATATCAGCTCAAGAAGGATATTAAAGAATTGGGTTTCTTCACTGAGTATGGGGATGCCAATAGATACAAGCTTCTTGAAGTTATAGGGAAGGGTAGCTATGGAGTTGTTTGTGCGGCAATTGACACACACACTGGAGAAAAGGTAGCAATAAAGAAGATCCATGATGTTTTTGACCATGCATCTGATGCCATTAGAATTCTTCGTGAAGTCAAATTACTCAGACTTTTAAGGCACCCTGATATTGTAGAAATTAAGCGGATAATGTTGCCACCTTCAAAGAGAGATTTTAAAGATATTTATGTAGTCTTTGAGCTCATGGAATCTGATCTCCATCAAGTCATTAAAGCTAATGATGATTTAACCCGTGAACATCATCAGTTTTTTCTTTATCAGCTCCTACGTGCATTGAAATATATGCATACAGCAAATGTGTATCACAGAGACCTCAAACCCAAGAACATATTGGCAAATGCAAATTGCAAACTCAAAATTTGTGATTTAGGACTGGCAAGAGTTGCATTCAATGATGCTCCGACAACAATATTTTGGACAGATTATGTTGCTACTAGATGGTACAGAGCCCCAGAACTCTGTGGAGCATTCTCTTCTAAGTATACACCGGCTATTGATATATGGAGCATTGGCTGCATCTTTGCTGAGGTCCTCACTGGAAAGCCATTGTTTCCTGGTAAAAGCGTTGTACATCAAATAGATTTGATTACTGATCTTCTTGGAACCCCATCACCAGAAACTATTTCAGGAGTTCGAAATGAGAAGGCGAGAAGATATTTGATGGAAATGAAGAAAAAACGGCCCGTGCCTTTTGAGCAGAAATTTCCAAATGCAGATCCATTGGCACTTCGCCTTTTGCAAAGGCTTCTAGCATTTGATCCCAAAGATCGGCCAACTGCTGAAGAGGCACTGGCTGATCCTTATTTCAAGGGCTTGTCCAGAGTTGAGAGAGAACCTTCTTGTCAGTCAATTTCAAAGTTGGAATTCGAGTTTGAGAGGCGAAGGTTGACAAAGGAGGATATAAGAGAACTAATATATCGTGAAATACTGGAATATCACCCTCAGATGCTTAAAGATTACATGAGTGGAACTGAAGGCAACTTTCTCTATCCTAGTGCAATAGCCCAATTCAGAAAGCAATTTGCTTATCTCGAGGAAAATGGTGGCTCAGTCACTCCTCCAGAAAGGAGACATGTCTCCCTTCCAAGGCCCACTGTTCACTTCAGCACAATCCCTCTTAATACAAGTACAATGCCAAATTTCAATTTGTATGAGAACAAGCAAAATGCAGAAGAGGCATCTAGGAGTTTGAGTAGTTCCCGGCCTCCACCAAGGGCACCAACAGCCAAGCCAGGGAGAGTGGTAGGCCCAGTTTTACCCTATGAAGATGGCAGAAGCACAAATACTTGTTATGACCTAAGGATCTTTTATCAAAATGCTCTTCCCCAACAAGCAGCTGGTTCTCCTAACTGCTTTTTTAGACCTCAACCCACAAACTCTCAGATGACTGTATCAGAGACCCACCAGGTTTTTTCACAATGCAAGCATCAAGTCCCATTCCAGCATTGTCATCATCTAACCAGACCTGCGATTGACCTCAACACCAACCCGTATCACCAAGAAGCCAAGTTCGATCGGTTTGATAATCCCATGATTATGATGGATACCAGGCTGCTGCAGGCACAATCTCACTATGGTGCCGTTGGTGCTGCAGCAGTAGCCATTGCAGCTCATAGACATTCTGGTGCTGTCCAGTATGGATTGTCATAG 1791 0.4216 MQQYQLKKDIKELGFFTEYGDANRYKLLEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFDHASDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQLLRALKYMHTANVYHRDLKPKNILANANCKLKICDLGLARVAFNDAPTTIFWTDYVATRWYRAPELCGAFSSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQIDLITDLLGTPSPETISGVRNEKARRYLMEMKKKRPVPFEQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLSRVEREPSCQSISKLEFEFERRRLTKEDIRELIYREILEYHPQMLKDYMSGTEGNFLYPSAIAQFRKQFAYLEENGGSVTPPERRHVSLPRPTVHFSTIPLNTSTMPNFNLYENKQNAEEASRSLSSSRPPPRAPTAKPGRVVGPVLPYEDGRSTNTCYDLRIFYQNALPQQAAGSPNCFFRPQPTNSQMTVSETHQVFSQCKHQVPFQHCHHLTRPAIDLNTNPYHQEAKFDRFDNPMIMMDTRLLQAQSHYGAVGAAAVAIAAHRHSGAVQYGLS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1219 596 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Alju10g1219 596 FunFam Mitogen-activated protein kinase 111 339 - -
Alju10g1219 596 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Alju10g1219 596 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Alju10g1219 596 MobiDBLite consensus disorder prediction 435 450 - -
Alju10g1219 596 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Alju10g1219 596 MobiDBLite consensus disorder prediction 435 466 - -
Alju10g1219 596 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1219 596 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1219 596 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Alju10g1219 596 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 363 - -
Alju10g1219 596 CDD STKc_TDY_MAPK 24 361 - -
Alju10g1219 596 FunFam Mitogen-activated protein kinase 15 119 - -
Alju10g1219 596 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1219 Alju-ChrAlju10 13156089 13161569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1219 1 594 MAP Kinase Gene Family AT1G53510 67.197 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Alju10g1219 Pkinase 5.5e-66 CL0016