Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1203 ATGCTTTGCGCTCTCGGTAAGATCGTCCCTTTTCGGAGGCAAATCATCAACACAATCTCTCCTTCAACATCTCAACAATTACTTTGCATTCAAAACCAATGGCTACCTCCTACTGCCAGGTACTGTAATTCAACTTCGTCCAATGGGCATTCTTTCACAGTCTCATATCTCATTGACGCTTGTGGTTTCTCACCCGAAGAAGCTGCTTCAGCTTCCAAGTATGTCACCTTGGAAACGCGAGAAAAACCAGATCTGGTTATCAATTTCTTGAAGAATATGGGGTTCTCAAAATCCCAGATTATTCGTTTCACAAGAGAAATCCCACAGTTCCTTCGATCTGACCCTGAGAAAACCTTTCTGCCTAAGATCGATTTTTTCATATCCAGAGGCGTTTTGAGGTCTGACATCCCTAAGCTCTTGTGCAGTCATCCTAACATCATGAGAAGAAGCTTGGATAAGGTGCTCATTCCTTCGTTTGATTTCTTTCAGGATTTGTTTCAATCTGACGACACATTCATTAAAGTTCTTAAATCTTGCTCGGGCATTCTTGCTGATAATAAGACCCGTGTCGTGCCCAATATGAAGATATTAAGAGAAGCCGGAGTTCCTGAATCAAATGTCATTAAATTGTTGCAACTGTATCCCAGGACATTTATTATAAGTACTGGTCGCTTCAAGATGATTGTGAAGGAGCTTCAGGAAATGGGGTTTGATCCTTCAAAGTATCAATTTGTTCTGGCCGTTTATGCGTTTGCATCACTAAGCAAATGGACATGGTCCAAAAAGGCTAATGTGTATAAGAAGTGGGGCTGGTCAGACAATGACATTGTTGCTGCTTTCAGAAGGTTCCCATTTTGTATGAAGGGATCTGAGGATAAAATTGATGCAATATTAGAGTATTTTATCCTTAAATTGGGATGTAATTCTTCTGTTATTTGCACATATCCTTATGTTGTGGGATTTAGTCTGAAGAAACGAATTGTTCCAAGAGGTGCCGTCATTCAAGTTCTCTTGTCAAAGGGTCTGGTGAAAAAGGGAAAATTTCTTGGAGCATTTAAATTATCTGAAAAGGACTTTCTAAGGAGGTATGTCTTTTGTCATGAGCAGGAAGCTAATGAATTATTTGAGTTGTATCAGTCTAAATTGGATCTTGCAAGGGAAGTGGAGACTGGATAG 1176 0.3997 MLCALGKIVPFRRQIINTISPSTSQQLLCIQNQWLPPTARYCNSTSSNGHSFTVSYLIDACGFSPEEAASASKYVTLETREKPDLVINFLKNMGFSKSQIIRFTREIPQFLRSDPEKTFLPKIDFFISRGVLRSDIPKLLCSHPNIMRRSLDKVLIPSFDFFQDLFQSDDTFIKVLKSCSGILADNKTRVVPNMKILREAGVPESNVIKLLQLYPRTFIISTGRFKMIVKELQEMGFDPSKYQFVLAVYAFASLSKWTWSKKANVYKKWGWSDNDIVAAFRRFPFCMKGSEDKIDAILEYFILKLGCNSSVICTYPYVVGFSLKKRIVPRGAVIQVLLSKGLVKKGKFLGAFKLSEKDFLRRYVFCHEQEANELFELYQSKLDLAREVETG 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1203 391 PANTHER CGI-12 PROTEIN-RELATED 48 368 IPR003690 GO:0003690|GO:0006355
Alju10g1203 391 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Alju10g1203 391 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Alju10g1203 391 SMART mt_12 173 203 IPR003690 GO:0003690|GO:0006355
Alju10g1203 391 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Alju10g1203 391 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Alju10g1203 391 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Alju10g1203 391 Pfam mTERF 196 359 IPR003690 GO:0003690|GO:0006355
Alju10g1203 391 Pfam mTERF 87 310 IPR003690 GO:0003690|GO:0006355
Alju10g1203 391 Gene3D Transcription termination factor 3, mitochondrial 155 378 IPR038538 -
Alju10g1203 391 FunFam Mitochondrial transcription termination factor-like 151 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1203 Alju-ChrAlju10 12955004 12956179 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju10g1203 mTERF 6.1e-27 No_clan