Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1199 ATGTCTCGTTCAATCCGCAAAGCTATTATCGCCATCTCTCCATCAACATTTCAGCGTCTGATTTATGTTCAAACCCAGTGGTTTTCATCGAGGTACGCTTTTTCAACCTCGTCCAATGGCCATTCTTTCACCTTCTCATATCTCATTGACATCTGTGGCTTCTCCCCCAAACAAGCTGCTTCAGCTTCTAAGCGTGTCAGCTTTGAATCGCGAGATAAGCCAGATTTGGTTATCGAGTTCCTCAAAAGTCATGGATTCTCACAGCCCCAGATTGTTCGTTTCATCACACAGGTCCCAAAGCTTCTTCGATCTGATCCTGAGAAAACCCTTCTGTCCAAGATCGAGTTTTTCAAATCCAGAGGCGTTTCGATCTCACACATCCCAAGACTCATATGTTCTTACCCTGCCATCATGAAAAGAAGCCTAAGTAAGCAGCTCATTCCTTCCTTTGATTTATTACGAGATATTGTTCATTCTGATGAGAAGCTCATTAAAGCTCTTCAATATTGCTCTGGCATTCTTATTGACACCAATACTTTTGCTGTGCCTAATATGGAGCTTTTGCGAGAAGCAGGAGTTCCTGAATCAAATGTCATTAAGTTGTTGCATTTGTATCCTAGGACATTGACTAAAGGTCCTAATAGGTTTAAGGACATTTTGGAGGAAGTTAAGGAAATTGGGATTGATCCTTTAAAGGTTCAATTTATTATGGCTGTTCATGTTTGTTCAACCTTGAAAAAATCCACACGGGATCGAAAGGCTGATCTTTATAAGAAGTGGGGTTGGCCTGACAATGACATTCTCACGGCATTTAGAAAGTACCCCACTTTTTTGACAGTGTCAGAGGATAAGATTGATGCAGTAATGGAAATTCTTGTCAATAAATTGGGATGTGATACTTCCACTTTTAGCAAGTATCCTACAGTTGTTTCAATGAGTTTGAATAAGCGAATTGTTCCCCGGGGTGCTGTCATTCAAGTTTTGTTGTTAAAGGGTCTGGTGAAAAAGAAGACATTGCTTGGAATATTTAAATTGTCTGAAAAGGACTTTTTAAGGAGGCATATCTTCAGCCACGAGCGGGAAGCTCGTGAATTATTGGAGTTGTATCGGTCTAAACTGGATCTTGCAAGGTAA 1134 0.4056 MSRSIRKAIIAISPSTFQRLIYVQTQWFSSRYAFSTSSNGHSFTFSYLIDICGFSPKQAASASKRVSFESRDKPDLVIEFLKSHGFSQPQIVRFITQVPKLLRSDPEKTLLSKIEFFKSRGVSISHIPRLICSYPAIMKRSLSKQLIPSFDLLRDIVHSDEKLIKALQYCSGILIDTNTFAVPNMELLREAGVPESNVIKLLHLYPRTLTKGPNRFKDILEEVKEIGIDPLKVQFIMAVHVCSTLKKSTRDRKADLYKKWGWPDNDILTAFRKYPTFLTVSEDKIDAVMEILVNKLGCDTSTFSKYPTVVSMSLNKRIVPRGAVIQVLLLKGLVKKKTLLGIFKLSEKDFLRRHIFSHEREARELLELYRSKLDLAR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1199 377 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Alju10g1199 377 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Alju10g1199 377 SMART mt_12 164 194 IPR003690 GO:0003690|GO:0006355
Alju10g1199 377 SMART mt_12 199 229 IPR003690 GO:0003690|GO:0006355
Alju10g1199 377 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Alju10g1199 377 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Alju10g1199 377 Gene3D Transcription termination factor 3, mitochondrial 177 365 IPR038538 -
Alju10g1199 377 Gene3D Transcription termination factor 3, mitochondrial 44 176 IPR038538 -
Alju10g1199 377 Pfam mTERF 78 302 IPR003690 GO:0003690|GO:0006355
Alju10g1199 377 Pfam mTERF 289 351 IPR003690 GO:0003690|GO:0006355
Alju10g1199 377 FunFam Mitochondrial transcription termination factor-like 142 362 - -
Alju10g1199 377 PANTHER CGI-12 PROTEIN-RELATED 39 359 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1199 Alju-ChrAlju10 12924640 12925773 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju10g1199 mTERF 5.9e-28 No_clan