Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1197 ATGTCTGGTTTTCTCAGCAGAGCGATTGCTTGTAGGCGGCACATTATCAACGCAAATTCTCCTTCAACAACATTTCAAAATCTTCTCTCTGCTCAAATCCAATGGCTTTCTGTGAGGTACGCAACTTCAACCGCCTCAAACAATGCTCATTCTTTCACAGTCTCATATCTAATTGACACATGTGGCTTCTCCCCTCAAGATGCTGAAGCAGTTTCTAAGCGTGTCAGCTTCGAAACGCGAGATAAGCCAGATGTAGTTATCAATTTCCTGAAAACGCAAGGATTTTCTCGATCCCAGCTTCTTCGTTTCATTAGAAATGACCCTGAATTTCTTCGATATGATCCTGACAAAACCTTTCTCCCCAAGATTGAGTTTCTCAAATCCCAAGGTGTTTCGAGCTCACTCATCCCTAGGCTCTTATGTAGTTGCCCTAACATTATGGGGAGAAGCTTAAGTAATCAGCTCATTCCTTCCTTTCATTTCTTTAGGGATTTGTTTCAATCCGATGAGAGGCTCATTAAATCTCTCACATATTGCTCGAGCATTCTTCTATGCATTAACACACATGTCTTGCCTAATATGAAGCTGTTACGAGAAGAAGGTGTTCCCGAATCATATATCATGAAATTGTTGCAGTTTTTCCCTAGGACACTAACTAGAAAACCTGTTCGGTTTAAGGTCGTTGTGGAAGAAGTGAAGGAACTTGGGCTTGATCCTTTGAAGTTTCATTTTCTTATGGCTGTTAGGTTTCTGGTTTATTATGGGCAGAAAGTTAGTGGATTATTAGATTTGTATCAGTCCAAATTGGATCTTGCAAGATGCGACACAGTATCAATTTTGATGTGGTTTGCTTTAATTTATGTTGGAATTGACTTATCCAGTTTCCGGAAGCAGATCCTCTCATCATCTCTCTTCGTAGGTTTCCCCTGGGCTCCGTCGTATGCTCTTCAACAGACTCCGGCTTCGCTTATCTTGCTCGAGACGCCGGAATCCATGTTTCCTTTTCTCCGCAGAGCCATCCCTTATCGGAGGCATATTTTCAACGCAATCTCTCCTCCTTCAACATTTCAGCTTCAACTTTGTCTCCAAACCCAGTGGTCTTCTGTGAGGTACGCTAACTCAAACGCCTCAAACGGGAATTCTTTCACGGTCTCTTATCTCATTGATTCATGTGGCTTCTCACCCCAAGAAGCTGAAGCAGCTTCTAAGCGTGTCAACCTCGAAACGCGAGATAAGCCAGATCTGGTTATCAAGTTCCTCAAAGGTCACAGATTCTCACAATCCCAGATTCTTGGTCTCATTAGATATGTTCCAGAGCTTCTTCGATATGATCCTGAGAGAGCCTTTCTGCCCAAGATTGAATTCTTCAAATCCAGAGGCATTTCGAGCTCACACATCCCTAGGCTCTTTTATCAGTCTCCTAACATCATGAGACGAAGCTTAAGTAAGCATCTCATTCCTTCCTTTAATTTCCTTCGAGATTTGTTTCAATCTGATGAGAAGCTCATTAAATCTCTTCAATGTCACTCGGCCATTCTTCTTGATCCTAAAACCTCTGTAGTGCCTAAAATGGAGCTACTGCGAGAAGCAGGAGTTCCTCAATCAAACATCGTCAAATATTTGCAGTTTTTCTCTAGAACATTGACTAATAATCCTGTTCGATTTAAGAAGGCTGTGGAGGAAGTGAAAGAACTTGGTTTTGATCCTTTGACGTTTCTATTTCTAGCGGCTGTTCATGTGTGCATAAGCTTGAAAAAATCCACAAGGGATAAAAAGGCTGATGCATATAAGAAATGGGGTTGGTCTGACAACGACATTGTTACCGCATTTAGAAGGTTCCCTGTCTGTATGACACTGTCAGAAGATCAGATTGATGCAAAATTAGAGGTGTTTGTCAATCAATTGGGCTGTAACCCCTCCAGTATTAGCAAATATTCTAGTGTTTTGGGATATAGTTTGAAAAAACGAATTGTTCCAAGAGCTGCTGTCCTTCAAGTTCTATTGTCAAAGGGTCTGATGAAAAGTGAAGATTTTCTTGTAAAATTTGCGCTTGCTGAAAAGGACTTTCTAAGGGGGCTTTTCCTTCGTCAAGGGCAAGAAGTAGCAAATGAGTTATTGGAGTTGTATCGCACAAAACTGGATCAAGCTAGATGA 2154 0.4146 MSGFLSRAIACRRHIINANSPSTTFQNLLSAQIQWLSVRYATSTASNNAHSFTVSYLIDTCGFSPQDAEAVSKRVSFETRDKPDVVINFLKTQGFSRSQLLRFIRNDPEFLRYDPDKTFLPKIEFLKSQGVSSSLIPRLLCSCPNIMGRSLSNQLIPSFHFFRDLFQSDERLIKSLTYCSSILLCINTHVLPNMKLLREEGVPESYIMKLLQFFPRTLTRKPVRFKVVVEEVKELGLDPLKFHFLMAVRFLVYYGQKVSGLLDLYQSKLDLARCDTVSILMWFALIYVGIDLSSFRKQILSSSLFVGFPWAPSYALQQTPASLILLETPESMFPFLRRAIPYRRHIFNAISPPSTFQLQLCLQTQWSSVRYANSNASNGNSFTVSYLIDSCGFSPQEAEAASKRVNLETRDKPDLVIKFLKGHRFSQSQILGLIRYVPELLRYDPERAFLPKIEFFKSRGISSSHIPRLFYQSPNIMRRSLSKHLIPSFNFLRDLFQSDEKLIKSLQCHSAILLDPKTSVVPKMELLREAGVPQSNIVKYLQFFSRTLTNNPVRFKKAVEEVKELGFDPLTFLFLAAVHVCISLKKSTRDKKADAYKKWGWSDNDIVTAFRRFPVCMTLSEDQIDAKLEVFVNQLGCNPSSISKYSSVLGYSLKKRIVPRAAVLQVLLSKGLMKSEDFLVKFALAEKDFLRGLFLRQGQEVANELLELYRTKLDQAR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1197 717 SMART mt_12 431 462 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 SMART mt_12 607 638 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 SMART mt_12 173 203 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 SMART mt_12 639 673 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 SMART mt_12 503 533 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 SMART mt_12 538 568 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 SMART mt_12 467 498 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 PANTHER CGI-12 PROTEIN-RELATED 378 691 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 FunFam Mitochondrial transcription termination factor-like 481 700 - -
Alju10g1197 717 Gene3D Transcription termination factor 3, mitochondrial 478 693 IPR038538 -
Alju10g1197 717 Gene3D Transcription termination factor 3, mitochondrial 53 240 IPR038538 -
Alju10g1197 717 Pfam mTERF 578 678 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 Pfam mTERF 87 238 IPR003690 GO:0003690|GO:0006355
Alju10g1197 717 Pfam mTERF 417 568 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1197 Alju-ChrAlju10 12908073 12915288 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju10g1197 mTERF 1.5e-14 No_clan