Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1196 ATGTTTCCTTTTCTCCGCAGAGCCATCCCTTATCGGAGGCATATTATCAACGCAATCTCTCCTCCTTCAACATTTCAGCTTCAACTTTGTCTCCAAACCCAGTGGTCTTCTGTGAGGTACGCTAACTCAAACGCCTCAAACGGGAATTCTTTCACGGTCTCTTATCTCATTGATTCATGTGGCTTCTCACCCCAAGAAGCTGAAGCAGCTTCTAAGCGTGTCAACCTCGAAACGCGAGATAAGCCAGATCTGGTTATCAAGTTCCTCAAAGATCACAGATTCTCACAACCCCAGATTCTTGGTCTCATTAGATATGTTCCCGAGCTTCTTCGATATGATCCTGAGAGAGCCTTTCTGCCCAAGATTGAATTCTTCAAATCCAGAGGCATTTCGAGCTCACACATCCCTAGGCTCCTTTATAGGTCTCCTAACATCATGAGACGAAGCTTAAGTAATCATCTCATTCCTTCCTTTAATTTCCTTCGAGATTTGTTTCAATCTGATGAGAAGCTCATTAAATCTCTTCAATATTGCTCAGCCATTCTTCTTGATCCTAAAACCTCTGTAGTGCCTAAAATGGAGCTACTGCAAGAAGCAGGAGTTCCTCAATCAAACATCATCAAATATTTGCAGTTTTTCTCTAGTACATTGACTAATAATCCTGTTCGATTTAAGAAGGCTGTGGAGGAAGTGAAAGAACTTGGTTTTGATCCTTTGGCGTTTCAATTTCTAGCGGCTGTTTATGTATGCATAAGCTTGAAGAAATCCACAAGGGATAAAAAGGCTGATGTATATAAGAAATGGGGTTGGTCTGATAACGACATTGTTGCAGCATTTAGAAGGTTCCCTGTCTGCATGACACTGTCAGAAGATCAGATTGATGCAAAATTAGAGGTTTTTGTCAATCAATTGGGCTGTAACCCCTCCAGTATTAGCAAATATTCTAGGTTTTTGGGATATAGTTTGAAAAAACGAATTGTTCCAAGAGCTGCTGTCCTTCAAGTTCTGTTGTCAAAGGGTCTGATGAAAAGTGAAACTTTTCTTGTAAAATTTAGGCTTACTGAAAAGGACTTTCTAAGGAGGCTTGTCCTTTGTCAAGGGCAAGAAGTAGCAAATGAGTTATTGGAGTTGTATCGCACAAAACTGGATCAAGCTAAATGA 1161 0.4057 MFPFLRRAIPYRRHIINAISPPSTFQLQLCLQTQWSSVRYANSNASNGNSFTVSYLIDSCGFSPQEAEAASKRVNLETRDKPDLVIKFLKDHRFSQPQILGLIRYVPELLRYDPERAFLPKIEFFKSRGISSSHIPRLLYRSPNIMRRSLSNHLIPSFNFLRDLFQSDEKLIKSLQYCSAILLDPKTSVVPKMELLQEAGVPQSNIIKYLQFFSSTLTNNPVRFKKAVEEVKELGFDPLAFQFLAAVYVCISLKKSTRDKKADVYKKWGWSDNDIVAAFRRFPVCMTLSEDQIDAKLEVFVNQLGCNPSSISKYSRFLGYSLKKRIVPRAAVLQVLLSKGLMKSETFLVKFRLTEKDFLRRLVLCQGQEVANELLELYRTKLDQAK 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1196 386 FunFam Mitochondrial transcription termination factor-like 150 370 - -
Alju10g1196 386 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Alju10g1196 386 SMART mt_12 308 342 IPR003690 GO:0003690|GO:0006355
Alju10g1196 386 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Alju10g1196 386 SMART mt_12 207 237 IPR003690 GO:0003690|GO:0006355
Alju10g1196 386 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Alju10g1196 386 SMART mt_12 172 202 IPR003690 GO:0003690|GO:0006355
Alju10g1196 386 PANTHER CGI-12 PROTEIN-RELATED 47 365 IPR003690 GO:0003690|GO:0006355
Alju10g1196 386 Gene3D Transcription termination factor 3, mitochondrial 150 371 IPR038538 -
Alju10g1196 386 Pfam mTERF 86 237 IPR003690 GO:0003690|GO:0006355
Alju10g1196 386 Pfam mTERF 249 358 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1196 Alju-ChrAlju10 12898074 12899234 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju10g1196 mTERF 2.2e-14 No_clan