Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1189 ATGTCATCATCTTCCTCCTACGAGCTTGTCCTTACCAGCTCTCCTGATGGCCCCATCGTCGCCTACAATGCCTCCACTGGAACTCCACTCACTCGCTTCCTAGGCACCCGGTCACCCCTCCGCGGCCTCACCGTCGCCGGAAACAGCTTCATCGCCGCCTCCCACGTGTCACCAGACACAGCCGCAGTGTCCATTCACCTCTACAACTGGCACACTTCAAGTGTTCTTCACAGGTTCCCCGCGCCTGAGTTTGTCGCCCCACTTGCTGCCACTCCCGATGGCGGCTTTATCTTCGCCGGAGGCCAGTCCGGAAGCATCCATTGTTTCTCAGTTCCTTCAGGGGATGTGGTCAAGTCTTTTCCTGCCCACACAAAACCCATTTCTTGCCTCCAACTCACTAATGATGGGTCATTAGTAATTTCAGGTAGTGATGATGGTAGCATTACGGTGATCCCAACTTTTCAAATAGTAGACTCATCAGACTCTGACTCAGATTCATCAAAAGACTTGATTTTGCACCATTTAAAGAAGGCACATTCATATTCAGTCACAGCCTTAAACACAGGAATAGGGCTATGCAACAATTCCATGCTTGTCTCTTCCTCTTTGGACTCAACCTGCAAGTTCTGGAATCTTCTTGAAGGGACTCTCCTTCGCACAGTGACCTTCCCTTGTTCCATAAATGGAGTAGCCATAAGCTCATCATCAGACTTATCACAGTACTTGTTGTTCGCTGCTGGATCAGATGGATCAATTTACAAAGCATCAATAACGGAAGCCATCAGAAAAACACTGAACGAAGAAGAAGTGACAGTGACGAACTGGAATAAGAAAAGCCACGTGGGGTCCACTGAAGCAGTGGTAGTGGTGAATGGAGGGAGAAATCTGGTGTCTGCAGGTGAAGATGGCAGTGTGTGGATGTGGGAGATTGAGAGAGAAGAAGTAACAGTGGTGATAAAGGATAATATTAACAGTAATAATGGAGGATTAATTATGGAAGGAATTAGTAGTATTAGTGATATGATAGTGGTTAGTGGGACTACTGGTGAGCATAGAGGAGGTAGAGGGAAGAACGGTGGTGGTTGCGGCGGCGGGTTTGTGAGTTCAGGGATGTTGTTGAAAGAAGTGATAAGGTCAATGAAGGAGATAATGGAGGTAGGAGAAGTATTGAGGGTGGTGGAGGAAGATAAGAGAAGGGCCATTAATATGTTAGAGTCTGCAATTGCTATGTATGAGAGGCTGTTGGAGCTCATACTTGAAGAAACTTTGAAAGGTACTTGTGACGATGATGAGAGTGATGAAAAACAAGAGAAGGAGGATGAGGATAAAGAAAGAGGAGAGAGTGAAAAGACAAAAAGTAATTATTAA 1368 0.4627 MSSSSSYELVLTSSPDGPIVAYNASTGTPLTRFLGTRSPLRGLTVAGNSFIAASHVSPDTAAVSIHLYNWHTSSVLHRFPAPEFVAPLAATPDGGFIFAGGQSGSIHCFSVPSGDVVKSFPAHTKPISCLQLTNDGSLVISGSDDGSITVIPTFQIVDSSDSDSDSSKDLILHHLKKAHSYSVTALNTGIGLCNNSMLVSSSLDSTCKFWNLLEGTLLRTVTFPCSINGVAISSSSDLSQYLLFAAGSDGSIYKASITEAIRKTLNEEEVTVTNWNKKSHVGSTEAVVVVNGGRNLVSAGEDGSVWMWEIEREEVTVVIKDNINSNNGGLIMEGISSISDMIVVSGTTGEHRGGRGKNGGGCGGGFVSSGMLLKEVIRSMKEIMEVGEVLRVVEEDKRRAINMLESAIAMYERLLELILEETLKGTCDDDESDEKQEKEDEDKERGESEKTKSNY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1189 455 PANTHER WD-REPEAT PROTEIN 18 8 422 IPR045227 -
Alju10g1189 455 ProSitePatterns Trp-Asp (WD) repeats signature. 296 310 IPR019775 -
Alju10g1189 455 MobiDBLite consensus disorder prediction 438 455 - -
Alju10g1189 455 MobiDBLite consensus disorder prediction 425 455 - -
Alju10g1189 455 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 8 314 IPR011047 -
Alju10g1189 455 Coils Coil 401 421 - -
Alju10g1189 455 Gene3D - 1 349 IPR015943 GO:0005515
Alju10g1189 455 SMART WD40_4 214 256 IPR001680 GO:0005515
Alju10g1189 455 SMART WD40_4 113 152 IPR001680 GO:0005515
Alju10g1189 455 SMART WD40_4 168 211 IPR001680 GO:0005515
Alju10g1189 455 SMART WD40_4 72 110 IPR001680 GO:0005515
Alju10g1189 455 SMART WD40_4 268 309 IPR001680 GO:0005515
Alju10g1189 455 Pfam WD domain, G-beta repeat 172 211 IPR001680 GO:0005515
Alju10g1189 455 Pfam WD domain, G-beta repeat 115 148 IPR001680 GO:0005515
Alju10g1189 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 318 IPR001680 GO:0005515
Alju10g1189 455 ProSiteProfiles Trp-Asp (WD) repeats profile. 120 150 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1189 Alju-ChrAlju10 12781700 12783304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1189 97 312 U-box Gene Family AT1G04510 25.346 1.13e-07 52.4