Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1180 ATGGAGTTAGCGAATCCAAGTTGTAAAGTGATCTATGTTTTGGCATTGGGATTAATGGCTCTGAATGTATTCACAGATTATGGAGGATGCAACGCTCTGCAGATACCAGATGATGAAGTGAGAGCTCTAAAAGCAATATCATCCAAGATGAAGGATTTGAATTGGAAGGTGAGCACTAATTCTTGTATGGATGGAGGCTTCAAAAATCAGAGTTTTGTAGGAGACGACATCATTAAGAATGTTACCTGTAATTGCACTTTCTCCAGTGGAAAAGTTTGCCATGTTACCCATATCGAGCTAAAGGGTCTCAATCTATCTGGAGTTATACCCAGTGAATTTGGTGATCTTTCCCAACTACAATTGCTTGATTTGACTCGCAACTATCTGAATGGCTCAATCCCAAAGAGCTTTGCTAAACTTCCTCTTGTTGTAATATCCCTTCTGGCTAATCGACTTAGTGGTCCAATTCCAAAGGAAATCAGCAATATTTCAACTTTGGAGGAGCTAGTGTTGGAAGATAATCATTTAGAAGGAACTCTTCCTTCTAGTCTCGGAAAATTGAAGCACTTACGCAGATTGCTTCTTTCTTCAAATAATTTCTCAGGGACGGTACCTGAAAGTTTTGGCAATCTAAAGAAACTAGAAGATTTTAGGTTAGATGGAAACACCATGTCAGGAAAATTACCCAGTTTTATTGGAAACTGGACCAATCTTGATAGATTGGATTTGCAGGGAACATCCATGGAAGGTCCAATTCCCCCAACCATAGCTTTGTTAACGAATTTGACTCAGTTGAGAATATCTGATTTGAATGGGAAAACAACAACGAGATTTCCTGATCTAAAGAATTTGAAATCCTTGAAACAATTGGTGCTGAGAAATTGCTCAATTACTGGTTCCATTCCAAATTACATTGGTCAAATGGAAGAGTTAGTTACTCTAGATTTGAGCTTCAACAAGTTGACTGATGGAATCCCAGATGAAATAGATGACTTGAAAAAACTAGATTACATGTTTTTGACTCATAATTCGTTGAGTGGAGAAATTCCGGGATGGGTACTAGTAAACAAATATAACTTGGATTTATCTTACAACAATTTTTCAAAGACTTCTGCTAAGATTTGCCAGTTGAAGGATGTAAACCTGGTTTCAAGCCTCTCATCTTCAGCAAACACCCAAGTTACATGCCTGAAAAAGGACCTTCCTTGTGGAGGAAAACCCAAGTATCATTCAATGTTCATAAACTGTGGAGGATCAGAAATGGATTACGAGGGGAACAAGTATGAAAGTGACCTTGGTCAAGAGGGTATCTCATTTTTTAGCCCTGTTGATGACAGATGGGCTTATAGTAGCACAGGGACATACTTGGGAAACACGAAAGCTGATTACATTGCAAGAAACACATTTTCTCTCAACATTACTGGTCCAAGCTTCTACCAAACGGCTCGCCTTTCCCCGTTGTCCCTCAAGTATCACGGCTTCTGTTTGCTTAATGGAAATTATAATGTCAAGCTTTACTTTGCTGAGATTATGTTTTCTAATGACCAAACATTCAGCAGCCTCGGGAGGCGCATATTTGATGTTTCAATTCAAGGTAGGAAATATTTGAGTGATTTTAATATTGTGGAGGAAGCTGGTGGTGTTGGTAAAGGAATTTTCAGGGATTTCAATGTTGTTGTGAATGACAACACCTTGGAGATCCATTTGTACTGGGCAGGGAAAGGAACTACAGCTATTCCTGATAGAGGTGTATATGGACCTCTTATATCTGCTATTTCAGTAACCCCAAACTTTGAAATTCCTTCAGAAGGGCTTTCTGCTGGAGCCATTGCTGGAATTGTGGTTGGATCGTGTGTGTTCCTCGTACTGATATTGTTTGTCCTTAGAAAGATGGGATTCTTAGGTGGGAAAGATCAAAAAGACAAAGAACTACTAGATCTGAAAACGGGTTATTTCTCTTTAAGACAAATCAAAGCTGCCACTAATAACTTTTCTCCAGAAAATAAGATTGGTGAAGGAGGTTTCGGATCAGTGTACAAGGGTGTACTTCCAGATGGTACTGTCATAGCTGTGAAGCAGCTCTCCTCCAAATCAAAGCAAGGAAATCGTGAATTTGTTAATGAAATTGGAATGATTTCTGCTTTGCAACACCCAAATCTTGTGAAGCTTTTTGGCTGCTGCATTGATGGAAACCAGTTGTTATTGATATATGAGTACTTGGAGAATAACTGTCTTGCTCGCGCTCTTTTTGGTCATCAAGAACAGAAATTACACTTAGATTGGCCTACAAGAATGAAAATCTGTGTAGGTATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGATTGAAAATTGTTCATAGGGATATCAAGGCAACAAATGTTTTGCTTGATAAGGATTTGAATGCTAAGATCTCTGACTTTGGTTTGGCCAAACTTGATGAAGAAGAGAATACTCATATCAGCACAAGAATAGCAGGGACAATTGGTTATATGGCTCCTGAATATGCAATGCGAGGCTACTTGACTGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTAGAGATTGTTAGTGGAAAAAGCAACACAAATTACAGACCAAAGGAAGAGTTTGTTTATCTTCTTGACTGGGCCTACGTTCTTGAAGAGCAAGGAAACCTTCTTGAGCTAGTAGATCCAAGTCTTGGTTCGAGCTATTCCTCGAAAGAAGCCATGAGAATGTTGGAGTTAGCACTCTTATGTACTAATCCATCTCCAACTCTCAGACCGCCCATGTCCTCTGTTGTTAGCATGCTTGAAGGAAAATCGCCGATCCAAGCGCCGGTAATCAAGCGCCGGGCGGGTGACCAAGATGCAAGATTCAAAGCCCTTGAGATGTTATCACAAGACAGCCATAGTCAAACCTTTGTTTCTTCCACAATCTCACAAGAAAGCATGGAGCAAAGACTTCAATCAATTGGTCCATGGGCTGACTCCTCTGGTTCTCTTCCAAGTAAAGATTTCTCTTCATCTGATAAGCTTCTTAGGGATTCCAATGTATAA 3051 0.3959 MELANPSCKVIYVLALGLMALNVFTDYGGCNALQIPDDEVRALKAISSKMKDLNWKVSTNSCMDGGFKNQSFVGDDIIKNVTCNCTFSSGKVCHVTHIELKGLNLSGVIPSEFGDLSQLQLLDLTRNYLNGSIPKSFAKLPLVVISLLANRLSGPIPKEISNISTLEELVLEDNHLEGTLPSSLGKLKHLRRLLLSSNNFSGTVPESFGNLKKLEDFRLDGNTMSGKLPSFIGNWTNLDRLDLQGTSMEGPIPPTIALLTNLTQLRISDLNGKTTTRFPDLKNLKSLKQLVLRNCSITGSIPNYIGQMEELVTLDLSFNKLTDGIPDEIDDLKKLDYMFLTHNSLSGEIPGWVLVNKYNLDLSYNNFSKTSAKICQLKDVNLVSSLSSSANTQVTCLKKDLPCGGKPKYHSMFINCGGSEMDYEGNKYESDLGQEGISFFSPVDDRWAYSSTGTYLGNTKADYIARNTFSLNITGPSFYQTARLSPLSLKYHGFCLLNGNYNVKLYFAEIMFSNDQTFSSLGRRIFDVSIQGRKYLSDFNIVEEAGGVGKGIFRDFNVVVNDNTLEIHLYWAGKGTTAIPDRGVYGPLISAISVTPNFEIPSEGLSAGAIAGIVVGSCVFLVLILFVLRKMGFLGGKDQKDKELLDLKTGYFSLRQIKAATNNFSPENKIGEGGFGSVYKGVLPDGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLFGCCIDGNQLLLIYEYLENNCLARALFGHQEQKLHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPSLGSSYSSKEAMRMLELALLCTNPSPTLRPPMSSVVSMLEGKSPIQAPVIKRRAGDQDARFKALEMLSQDSHSQTFVSSTISQESMEQRLQSIGPWADSSGSLPSKDFSSSDKLLRDSNV 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1180 1016 MobiDBLite consensus disorder prediction 984 1016 - -
Alju10g1180 1016 Gene3D Phosphorylase Kinase; domain 1 634 739 - -
Alju10g1180 1016 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 947 - -
Alju10g1180 1016 SUPERFAMILY L domain-like 88 368 - -
Alju10g1180 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Alju10g1180 1016 Gene3D - 410 597 - -
Alju10g1180 1016 Pfam Protein tyrosine and serine/threonine kinase 667 929 IPR001245 GO:0004672|GO:0006468
Alju10g1180 1016 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 271 - -
Alju10g1180 1016 Pfam Leucine rich repeat 165 222 IPR001611 GO:0005515
Alju10g1180 1016 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Alju10g1180 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 409 597 - -
Alju10g1180 1016 Gene3D Ribonuclease Inhibitor 168 273 IPR032675 -
Alju10g1180 1016 Gene3D Transferase(Phosphotransferase) domain 1 740 953 - -
Alju10g1180 1016 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 370 - -
Alju10g1180 1016 MobiDBLite consensus disorder prediction 984 1005 - -
Alju10g1180 1016 Pfam Malectin domain 412 592 IPR021720 -
Alju10g1180 1016 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 39 203 - -
Alju10g1180 1016 ProSiteProfiles Protein kinase domain profile. 664 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1180 1016 SMART serkin_6 664 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1180 1016 ProSitePatterns Protein kinases ATP-binding region signature. 670 692 IPR017441 GO:0005524
Alju10g1180 1016 Gene3D Ribonuclease Inhibitor 274 386 IPR032675 -
Alju10g1180 1016 Gene3D Ribonuclease Inhibitor 38 166 IPR032675 -
Alju10g1180 1016 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 739 - -
Alju10g1180 1016 SUPERFAMILY Protein kinase-like (PK-like) 649 936 IPR011009 -
Alju10g1180 1016 CDD STKc_IRAK 670 937 - -
Alju10g1180 1016 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1180 Alju-ChrAlju10 12657867 12668929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1180 18 1005 Receptor kinase-like Gene Family AT1G53440 60.857 0.0 1221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g1180 PK_Tyr_Ser-Thr 4.4e-49 CL0016