Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1174 ATGTCAGGAAAACTACCCAATTTTATTGGAAACTGGACCCAACTTCAAGAACTGGTTATGGTGGGAACTTCCATGGAAGGCCCAATTCCTACAAGCATATCTCAGTTAACAAATTTACGAGAGTTGTATATATCTGATTTAAATGGACCAACAACAATGAGATTTCCTAATCTAGAGAATTTGACATCCTTGAAAAGGATATTTTTGAGTTTCAACAAGTTGATCGGTGAAATTCCAAACAATATAAGTGACTTGACCTCCCTAGAGTACATGCGCACTTGCTTGAAAAGGGGCCTTCCTTGTGCAGAAAAACCCAAGCATTATTCATTGTTCATAAATTGTGGAGGGCTAGAAACTGAATATGAGGGGAATAAATACGAAGACGACACAAATGCTGGAAGTATCTCATCCTTTTTCGTCCCTAATGAAGATAAATGGGCTTATAGCAGCACTGGAATACCTTACGGCGGCGGAAGACATGATAATAATTACATAGCAACAAACATATATTCTCTCAACATTACAGGTCCACCATTCTACCAAACAGCTCGCTTTTCCTCTTTGTCTCTCAAGTACCATGGCCTCTGTATGATTAATGGAAATTACAACGTCAAGCTACACTTTGCTGAGATTATGTATTCTAATGACCAAACTTTCAGCAGCCTTGGAAGACGCATATTTGATGTTTCAATTCAAGGTAGGAAATATTTGAGTGATTTCAACATCATGAAGGAAGCTGGTGGCGTTGGTAAGGGCATAGTTAAAGACTTTAACGTTGAGGTGAATGATAACACTTTAGAAATTCATTTATACTGGACTGGGAAAGGAACTACCTCTGTTCCTCATTTTAGTATCTATGGACCTCTTATATCTGCTATTTCAGTCACCCCAAACTTCAAAATTCATGGGAATTCTGCTGCAGCCATTGCCGGAATTGTGGCAGGATCATGTGTTGGTTACATGGCACCTGAATATGCAATGCGAGGATACTTGACTGATAAAGCAGATATTTATAGCTTTGGTGTTGTTGCTTTAGAAATTATAAGTGGAAAAAGCAATACGAGTTATAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGTTAGTTGTACATCTTACACTTTGCATCATTGA 1137 0.3826 MSGKLPNFIGNWTQLQELVMVGTSMEGPIPTSISQLTNLRELYISDLNGPTTMRFPNLENLTSLKRIFLSFNKLIGEIPNNISDLTSLEYMRTCLKRGLPCAEKPKHYSLFINCGGLETEYEGNKYEDDTNAGSISSFFVPNEDKWAYSSTGIPYGGGRHDNNYIATNIYSLNITGPPFYQTARFSSLSLKYHGLCMINGNYNVKLHFAEIMYSNDQTFSSLGRRIFDVSIQGRKYLSDFNIMKEAGGVGKGIVKDFNVEVNDNTLEIHLYWTGKGTTSVPHFSIYGPLISAISVTPNFKIHGNSAAAIAGIVAGSCVGYMAPEYAMRGYLTDKADIYSFGVVALEIISGKSNTSYRPKEEFVYLLDWVSCTSYTLHH 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1174 378 Gene3D Ribonuclease Inhibitor 1 101 IPR032675 -
Alju10g1174 378 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 107 298 - -
Alju10g1174 378 Gene3D Transferase(Phosphotransferase) domain 1 300 369 - -
Alju10g1174 378 Pfam Protein tyrosine and serine/threonine kinase 317 363 IPR001245 GO:0004672|GO:0006468
Alju10g1174 378 Pfam Malectin domain 109 293 IPR021720 -
Alju10g1174 378 SUPERFAMILY Protein kinase-like (PK-like) 318 368 IPR011009 -
Alju10g1174 378 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 318 371 - -
Alju10g1174 378 Gene3D - 106 298 - -
Alju10g1174 378 SUPERFAMILY L domain-like 3 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1174 Alju-ChrAlju10 12537186 12543352 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1174 2 98 Receptor kinase-like Gene Family AT1G53430 37.000 1.10e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g1174 Malectin 4.4e-39 CL0202