Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1165 ATGAGAAGAGGTGGATACCGATATGATGGTGCCGGCGGCTACAGGGGAGAGCCAAGTCGTCGGAATGACGGCAGATCTGGTGGAGGACCACCGCTAGGCGGTGGTGGAAGAGGCTACCATCACCCACCGCAGCCTCACAATGATCCTTCTGGGGGCGAGGACACAAGGAGAGGGAGATACAGAGATGGTGATGGACCTATTTGGGTAGCCGGTGTATCGGTTCATTCTCGTAATTCTCCTCCTGATCCTTGTATTTCATCCTTCTCTGTTTTGATACCCTCCTCTCGCATTGATGGCTCTAGGTTGGAAGAATTTGGGCATTTCAGGAATTGCGTTAAGACTGAGCTGATTGGGTTAAAGGTAAATGTGACACATCGCAGAACCAAACAGAAATTCACCATTGTAAGGTTATCAAACCATAACACAAGGGATATCACATTTACTTGTGACCCGTATGAAGTCAACATTGTTGACTATTTTTGGAATAAATACCATAAGAATATTGTACACAAAGATATTCCTTGTTTAGAATTTGGGAGAGGTGTCTATGTGCCAATGGAGTTTTGTATCTTAGTTGAGGGTCAGAGATATCCCAAAGAGAATTTGAATAAAAATGCTTCCATGTCTTTGAAAAATATGTTATTGGCCCCACCAAAGGTGAGACAGAGTGCCATACAAGCAATGGTTGAGTCAATGGTGGTATTATTCAAAATTTTGGGATGGAAGACTAGTGTTTTAGGACGCATTATTGAGCCACCAAAATTGAAAGTAGGTGGTCGACGTGGCGAGATTATGACAGTAACATTGGATCCAGAGAAATGCCATTGGAATCTGGTTGGAAAATCTGTGATAAAAGGCAAGCCAATTGAGCACTGGGGCATTATTGATTTCACAACCTCAGAGTCAGATTTCCGGTTCAAATTAAGATGCAAGGAGTTCATTCACAAGATGAAGGACAAATTTAGAAGTTTGGGCATTTACTTGAATGATCCTCTTTGGGTTGAACGATCTTCGATGCATCAACTTGCACATCACGGTTCGCTATCTGCATTACTTAAGAAATTGAATGACTGGGATCAAGTGCAATTTATTCTGTGTGTGATGTCTCAGAAACATGTTGAGTATAAGACGCTCAAGGGGATTCAGAGACAAAGAAGGTTGAACAAAGTGAGACCAGAAAAAATTGTTATTTTTCGTGATGGGTTGAGTGAAGCACAAAAGCGACACCAGACTCGGTTGTTTCGAGAGCAAGCTTCTGCTGGAAATGTGTCTCCTGGAACAGTGGTGGACACAAAAGTGGTATATCCTTTCAAGTTTGACTTTTACCTTTGCAGTCACTATGGAAGCTTAGGGACAGGCAAGCTAACTCATTATCATGTCTTGTGGGCTGAGCACAGGTTTACCTCTGATGAGTTACAGAAACTTATATATGATATGTGTTTTACCTTTGTGAGGTGCACTAAACCTGGATCTTTGGTCCCTCCGGTGTATTATGCTGATCTTGTTGCCTATCGAGAACGATTATACTGTGAAGCAAAGACTGAGTTGGATCCTTCATCTGCAAATGAACACAAGTATTTCAAGCTACATGAGCACCTAGAAGACATGATGTTCTTTGTCTAA 1623 0.4227 MRRGGYRYDGAGGYRGEPSRRNDGRSGGGPPLGGGGRGYHHPPQPHNDPSGGEDTRRGRYRDGDGPIWVAGVSVHSRNSPPDPCISSFSVLIPSSRIDGSRLEEFGHFRNCVKTELIGLKVNVTHRRTKQKFTIVRLSNHNTRDITFTCDPYEVNIVDYFWNKYHKNIVHKDIPCLEFGRGVYVPMEFCILVEGQRYPKENLNKNASMSLKNMLLAPPKVRQSAIQAMVESMVVLFKILGWKTSVLGRIIEPPKLKVGGRRGEIMTVTLDPEKCHWNLVGKSVIKGKPIEHWGIIDFTTSESDFRFKLRCKEFIHKMKDKFRSLGIYLNDPLWVERSSMHQLAHHGSLSALLKKLNDWDQVQFILCVMSQKHVEYKTLKGIQRQRRLNKVRPEKIVIFRDGLSEAQKRHQTRLFREQASAGNVSPGTVVDTKVVYPFKFDFYLCSHYGSLGTGKLTHYHVLWAEHRFTSDELQKLIYDMCFTFVRCTKPGSLVPPVYYADLVAYRERLYCEAKTELDPSSANEHKYFKLHEHLEDMMFFV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1165 540 Pfam Piwi domain 405 507 IPR003165 GO:0003676
Alju10g1165 540 Gene3D - 405 540 IPR036397 GO:0003676
Alju10g1165 540 ProSiteProfiles PAZ domain profile. 112 193 IPR003100 GO:0005515
Alju10g1165 540 CDD PAZ_argonaute_like 109 192 - -
Alju10g1165 540 SUPERFAMILY PAZ domain 106 230 IPR036085 GO:0005515
Alju10g1165 540 Pfam PAZ domain 107 205 IPR003100 GO:0005515
Alju10g1165 540 SUPERFAMILY Ribonuclease H-like 378 511 IPR012337 -
Alju10g1165 540 SMART PAZ_2_a_3 96 216 IPR003100 GO:0005515
Alju10g1165 540 SMART Piwi_a_2 293 511 IPR003165 GO:0003676
Alju10g1165 540 Gene3D paz domain 100 196 - -
Alju10g1165 540 ProSiteProfiles Piwi domain profile. 406 503 IPR003165 GO:0003676
Alju10g1165 540 Gene3D - 249 386 - -
Alju10g1165 540 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 111 381 - -
Alju10g1165 540 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1165 Alju-ChrAlju10 12093037 12095753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1165 385 522 Eukaryotic Initiation Factors Gene Family AT1G48410 40.449 1.14e-34 137