Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1142 ATGGTGTTTGTGCGGACGGTGGCTAACCAGTTCAGCTACGGAAGCAGCAGATCAACAGGGAGGGTAGACAGAGTCGGCGCGGAAGGAAGGGTTTATGCCCCTGAGGGAAAGAAATACTCACACAAGAAAATGTCTGGGGTTGGACCTCTCACACAGGATTGGGAGCCCGTGGTGATCCGGAAGAAGGCACCAACAGCTGCGGCCAAGAAAGATGAGAAGGCTGTCAACGCCGCTCGTCGCGCTGGCGCCGATGTTGAAACCGTAAAAAAATTTAATGCTGCGACAAATAAAGCAGCCTCCAGCAGCACTTCTTTAAACACAAAGAAGCTTGATGACGAAAATGAGAATCTTCATCATGAACGGGTACCAACTGAACTAAAGAAGGCCATCATGCAGGCTAGGATGGAAAAAAAGCTTACTCAGGCTCAACTAGCTCAGATGATAAATGAGAAGCCTCAAGTGATTCAGGAGTATGAATCAGGTAAAGCCATTCCAAATCAACAAATATTAGGTAAACTGGAGAGAGCCCTTGGTGCAAAACTGCGTGGAAAGAAATGA 558 0.4767 MVFVRTVANQFSYGSSRSTGRVDRVGAEGRVYAPEGKKYSHKKMSGVGPLTQDWEPVVIRKKAPTAAAKKDEKAVNAARRAGADVETVKKFNAATNKAASSSTSLNTKKLDDENENLHHERVPTELKKAIMQARMEKKLTQAQLAQMINEKPQVIQEYESGKAIPNQQILGKLERALGAKLRGKK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1142 185 SMART mbf_short4 129 184 IPR001387 -
Alju10g1142 185 Pfam Helix-turn-helix 130 180 IPR001387 -
Alju10g1142 185 Pfam Multiprotein bridging factor 1 52 122 IPR013729 -
Alju10g1142 185 SUPERFAMILY lambda repressor-like DNA-binding domains 124 181 IPR010982 GO:0003677
Alju10g1142 185 ProSiteProfiles Cro/C1-type HTH domain profile. 130 184 IPR001387 -
Alju10g1142 185 Coils Coil 130 150 - -
Alju10g1142 185 CDD HTH_XRE 128 178 IPR001387 -
Alju10g1142 185 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 52 185 - -
Alju10g1142 185 FunFam Multiprotein bridging factor 1 114 185 - -
Alju10g1142 185 Gene3D - 114 185 IPR010982 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1142 Alju-ChrAlju10 11631328 11635729 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Alju10g1142 MBF1 3.6e-24 No_clan