Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1139 ATGTCCGAAAGCTTATCAGATAGTGTTTCTGATCAAAGTCAGCAAGTTGCTCGTCGATCTGGAAATTTCAAACCTGATCATTGGGATTATGATTATCTTTTGTCTTTGGACAATAAGTATAAGGAACAAGCATACGAAGAAGAAAGCAGAAAACTTAGGGAACAAGTGAGGATAATGCTTTTGGAAACAGTGAATCCTCTGGATCAGCTTGAGTTTATTGATACCTTGCAAAGGCTTGGTCTTAATTATCATTTTAAAAAAGAAATAAATAAGATTCTCGGAAATATTTATGATAATGTGGAGCATTTCAAGAGCAAGCAGAATCTACATGCTACAGCGCTTGAGTTTCGACTCTTGAGACAGCATAGCTATGATATATCTACAGATGTGTTTGATAGCTTCAAAGATGAAAGAGGTGGTGATGATTTTCAAACATCTCTATCTGAGGATATCAGGGGAACGCTCTCGTTATATGAAGCCTCGTTTCTTTCAATGGAAAATGAAACTGTTCTTGAAAAAGCTAAAGATTTTACCTCAAAATCTCTTAAAGACTTTGTGAGCAAGAACCCAGAACATGAACTCATATCCCAAGTGAAACATGCTTTGGAGGTTCCATTTCATTGGAATCTACCGAGATGGGAGGCTCGTTGGTTCATTGGTGAATATGAAAGAATTCCTAACATGAATCCCACTTTACTTCATCTTGCCAAATTGGATTATAACATGCTTCAAGCCATGTACCAGGAAGAAGTAAAATCTAATATAAGAAGTGGCTTGGAAAAGAAGGTGAAGTTTTTCAGGTGTAGGGTGGTGGATAACTATGTTTGGGGCCTTGGAATGCAAGATGGGCCAGAATATGGAAAATTAAGAAAAGTCATAGGAAATCTTTGTGCCATAATAACCCTCACAGATGATATGTATGATGTTTATGGTACTTCGCAAGAATTAGAGCTTTTCACTGAAGCTATTATCAGGTGGGATGCAAATGACTTGGATAATCTCCCAGATTACATGAAAGTAGTATTTTTCGCAATTTATAACTTTGCAGATGAAGTGGCTTCTGAGGTTCTGAAAGAAAAAGGGCACAACGTCCATTCCTATCTAAAGAAAGGGTGGCAAGATCTGTGTAGGGCATATATAGTTGAGGCAAGATGGTACCATGGTGGGAAAACGCCAAGGCTGAAAGAATATTTGGAAAATGGAAGTATTTCAATAGGTGCACATATTTCTCATCTTCATGCTTATCTTTACCTGCCAGACAATGCTATAAGGAAGATGGACTTGGATTCCTTAGACCCTTCTCGTTCAAATCTGATCTACTCGTCATCACTTAATGCCCGCCTTCTTAATGACCTCGGATCATTCAAGCGTGAGAAGAAGACAGGGGATGTACCTTCTGCAATTCAATTGTACATGAATGATAGTGGAGCTTCAGAAGAAGAAGCCATCCAACACATTAAGCGTTTAATATATAAAACATGGCAGAAGATCAATCAACAAGTGGCCACATCTTCCTTCTCTCGCGATTTCAACATGAGTGCTTGGGAAATTTCAAGGACTTCAATTTTCCATTACAGTAAAGAAGATGATTCCTACACTCTTCAGCATTCTGAATTTGAGGATCTTGTTCATTTGTTAATTTTTGATCCCATTCCCAATATTACATGGCTTTATCAAGAGCCTAGGTCGATTGTTCAAGAAAGGGCCCAAGAACGCAAGCCAGGTATGACATTTCCACCCAGAGACATTGCTCGGCGCCTGAGAAGAATCGCGATACCCGTGAACTCTTCGACAAAGAGAGTATCATTCACGTGGATCCTGCATGATTGGAGCGATGAGGAGTGTGTGAAAATTCTGAAGAATTGCAAGGAGGCAATTACAAGCAAAGGGGAAGGAGGGAAGTTGATAATAATAGACATGGTATTGGGAGAGGATGACGTGATGTTGAGAGACAAGAACAATAAATCAGTTGAGAATCAAATGTTGGTTGATGTGCTGTTGATGGTTTTGTATCCTGGAAAAGAGAGGTCTGAGAAAGAACTGTCCAACTTATTCCGTTCTGCTGGTTTCTCTCATTACAAGATTCATCCTGTTCTTGGTTCACGATCTCTCATCGAGGTTTATCCATGA 2130 0.392 MSESLSDSVSDQSQQVARRSGNFKPDHWDYDYLLSLDNKYKEQAYEEESRKLREQVRIMLLETVNPLDQLEFIDTLQRLGLNYHFKKEINKILGNIYDNVEHFKSKQNLHATALEFRLLRQHSYDISTDVFDSFKDERGGDDFQTSLSEDIRGTLSLYEASFLSMENETVLEKAKDFTSKSLKDFVSKNPEHELISQVKHALEVPFHWNLPRWEARWFIGEYERIPNMNPTLLHLAKLDYNMLQAMYQEEVKSNIRSGLEKKVKFFRCRVVDNYVWGLGMQDGPEYGKLRKVIGNLCAIITLTDDMYDVYGTSQELELFTEAIIRWDANDLDNLPDYMKVVFFAIYNFADEVASEVLKEKGHNVHSYLKKGWQDLCRAYIVEARWYHGGKTPRLKEYLENGSISIGAHISHLHAYLYLPDNAIRKMDLDSLDPSRSNLIYSSSLNARLLNDLGSFKREKKTGDVPSAIQLYMNDSGASEEEAIQHIKRLIYKTWQKINQQVATSSFSRDFNMSAWEISRTSIFHYSKEDDSYTLQHSEFEDLVHLLIFDPIPNITWLYQEPRSIVQERAQERKPGMTFPPRDIARRLRRIAIPVNSSTKRVSFTWILHDWSDEECVKILKNCKEAITSKGEGGKLIIIDMVLGEDDVMLRDKNNKSVENQMLVDVLLMVLYPGKERSEKELSNLFRSAGFSHYKIHPVLGSRSLIEVYP 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1139 709 Pfam Terpene synthase family, metal binding domain 233 495 IPR005630 GO:0000287|GO:0010333|GO:0016829
Alju10g1139 709 SUPERFAMILY Terpenoid synthases 229 552 IPR008949 -
Alju10g1139 709 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 557 709 IPR016461 GO:0008168
Alju10g1139 709 MobiDBLite consensus disorder prediction 1 20 - -
Alju10g1139 709 Pfam O-methyltransferase domain 600 691 IPR001077 GO:0008171
Alju10g1139 709 Gene3D Farnesyl Diphosphate Synthase 25 540 IPR008949 -
Alju10g1139 709 Gene3D - 65 228 IPR036965 GO:0010333|GO:0016829
Alju10g1139 709 FunFam Isoprene synthase, chloroplastic 64 228 - -
Alju10g1139 709 SFLD Terpene Cyclase Like 1 C Terminal Domain 228 551 IPR034741 -
Alju10g1139 709 Gene3D Vaccinia Virus protein VP39 543 709 IPR029063 -
Alju10g1139 709 PANTHER OS04G0344100 PROTEIN-RELATED 14 544 - -
Alju10g1139 709 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 224 IPR008930 -
Alju10g1139 709 Pfam Terpene synthase, N-terminal domain 28 202 IPR001906 GO:0010333|GO:0016829
Alju10g1139 709 CDD Terpene_cyclase_plant_C1 18 550 IPR044814 GO:0010333|GO:0016102
Alju10g1139 709 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 523 708 IPR029063 -
Alju10g1139 709 SFLD Isoprenoid Synthase Type I 228 551 - -
Alju10g1139 709 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1139 Alju-ChrAlju10 11613172 11621484 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1139 605 709 Monolignol Biosynthesis Gene Families AT1G51990 40.741 1.33e-15 77.4