Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1104 ATGGTTACCAGTAGTATGTGCAGTCTCCGTACGCTCTGCCTACGTTTTCCTCACCTCCCGGAGACACCGCTATTCCCGCCACATCGTTTCTCACTTCCTTGCCGGAGCCGGCGGACTCTGGTCACGGCCGCCGCAGTCTCTGAAACGTACAAAAAGAAGGAGACTAAAGAGAAGGTCATTGTGATTTCTGGACCCACCAGCGCCGGTAAAAGTCGCCTTGCATTGGAACTCGCGAAGCGGCTCAATGGCGAAATTGTCAGTGCCGACTCTGTTCAGGTGTACCAAGGTCTTGATGTTGGATCCGCTAAACCCTCTCCAAATGATAGAAAGGAGGTAAAACATCATCTGGTTGACATATTGCATCCATCTAAAGACTATTCAGTTGGACAATTTTTTGAGGATGCAAGGCAAGCGACAAGATGTATCCTTGACAATGGTCGTGTTCCCATAGTTGTTGGGGGAACTGGGTTGTATTTACGATGGTTCATATATGGAAAACCAGATGTTCCCAAATCCTCTCCAGATGTCAAATCTGAAGTATATTCAGAGTTAGCTGAACTGCAGAAAAATGAAGATTGGGATGCTGCTGTGCAGCTGGTAGTTGATGCAGGTGACGCAAAGGCCCAAACTTTAGCAGTGAATGATTGGTATCGATTACGGCGTAGCCTAGAGATTATCAAATCTAGTGGATCTCCTCCATCTGCTTATCGGGCGCCATATGATTCTTTCAAGGAACGGGGTGATTCTAGTGATACCAATGGTTTTGAATCTTCTGATGTCCAAATTTCTGGAGATTCAATGGAAGATTCCAAGTTATCAGATTTGCCTTATGAGTTCATATGCTTTTTCCTTTCTAGTGAGAGACTTGACCTATATAAAACAATTGACCAGCGGTGCGAAGATATGCTGTTAGAAAGGGATGGGATTCTGTGTGAGGCTCGATGGCTTCTAAAGTTGGGTCTTCATCCAAACTCCAATTCTGCAACACGAGCAATTGGTTATAGACAAGCTATGGAATACTTACTTAGATGCCAACAACATGGAGGGCAGAGTTCAGCTAAAGAATTTTACAATTTTTTATCTGAATTTCAAAAAGAAACTAGGAATTTTGCAAAAAGACAATTGACATGGTTTCGCAACGAGCATATATACCACTGGCTTGATGCTTCCAAGCCACAGAATGCAATTATAGAATTCATGGACCATGCTTATCATGATTGGAGTGGAAATCTCATTGTGCCTGAACACCTTAGAATGTCGAGAGATATATCTAATCGCCAAGAAGCTGCTCAACTTAAGTCTTACCGCACGAAAAATAGGCATTTCATGAAAGATGTAGATTGTTCTCATATTCTGGAGTGGGTGAATCAGAAAGAGGAATGCTATTCTGATTGCATGTAA 1401 0.4311 MVTSSMCSLRTLCLRFPHLPETPLFPPHRFSLPCRSRRTLVTAAAVSETYKKKETKEKVIVISGPTSAGKSRLALELAKRLNGEIVSADSVQVYQGLDVGSAKPSPNDRKEVKHHLVDILHPSKDYSVGQFFEDARQATRCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKSSPDVKSEVYSELAELQKNEDWDAAVQLVVDAGDAKAQTLAVNDWYRLRRSLEIIKSSGSPPSAYRAPYDSFKERGDSSDTNGFESSDVQISGDSMEDSKLSDLPYEFICFFLSSERLDLYKTIDQRCEDMLLERDGILCEARWLLKLGLHPNSNSATRAIGYRQAMEYLLRCQQHGGQSSAKEFYNFLSEFQKETRNFAKRQLTWFRNEHIYHWLDASKPQNAIIEFMDHAYHDWSGNLIVPEHLRMSRDISNRQEAAQLKSYRTKNRHFMKDVDCSHILEWVNQKEECYSDCM 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1104 466 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 59 236 IPR018022 GO:0008033
Alju10g1104 466 CDD NK 59 100 - -
Alju10g1104 466 Gene3D - 56 450 IPR027417 -
Alju10g1104 466 Gene3D - 168 238 - -
Alju10g1104 466 MobiDBLite consensus disorder prediction 230 264 - -
Alju10g1104 466 Pfam IPP transferase 92 381 - -
Alju10g1104 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 187 IPR027417 -
Alju10g1104 466 Hamap tRNA dimethylallyltransferase [miaA]. 59 401 IPR018022 GO:0008033
Alju10g1104 466 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 56 394 IPR039657 -
Alju10g1104 466 FunFam tRNA dimethylallyltransferase 9 167 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1104 Alju-ChrAlju10 11065568 11070807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1104 62 234 C2H2 Transcription Factor Family AT2G27760 27.072 1.23e-15 77.0