Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1076 ATGGAGACCCATTACCCCTCCTCCTCCGACAACCATGATGCTATTTTACCTCCAGGCTTTCGCTTCCACCCTACAGATGAAGAACTCATCACTTACTACCTCCTCAAGAAAGTTCTTGACAATAACTTCTCTGGTAGAGCCATCGCTGAAGTTGACCTCAACAAATGTGAGCCCTGGGAGCTTCCTGAGAAAGCGAAGATGGGAGAGAAGGAGTGGTACTTCTTTAGTCTTCGAGATAGGAAGTACCCAACTGGGTTAAGAACTAATAGGGCTACAGAAGCAGGTTACTGGAAGGCCACTGGGAAAGACAGAGAAATCTACAGCTCTAAGATTTGTGGTTTGGTTGGCATGAAGAAGACTCTTGTCTTCTATAGAGGAAGAGCCCCTAAAGGCGAGAAAAGCAACTGGGTTATGCACGAGTATCGCCTTGAAGGCAAATTCGCCTACCATTACCTCTCTCGCTCCTCCAAGGATGAGTGGGTTATTTCCCGAGTTTTCCAGAAGAGCGGCTCCGGCAACGGCGGTGGCTCCGCAGCCATATCCTCTACTTGCAGTGGCTCGAAGAATAAGGCGCGAAACATCATGAGCTCTTCTTCTAACTTGAGTCTCTACCCAGCTGAGCCGGGTTCCCCTTCCTCGGTCTACCTTCCACCCCTGCTTGATTCCTCTCCATTCTCGGCCGCCGCCGCAGCTAGCAGCACCGCCGCAGACAGTTGCTCTAATGCTTATGACAACTTGAATACCCCAAGAGAGCACGTGTCCTGTTTCTCCACATTCTCTGCCACCGCCAGCAACAACTACAGCTTTGACCTGCCCCCCGCCGCTCCGCCGCCTTCCGTCACGGTGGATCCCTTTGCTCGTTTTCAGAGAAACGGCGGCGTCTCCTTCCCGAGCCTGAGGTCGCTCCATCTGCAAGACAACCTTCAGCTTCCCTTCTTCATCCCGCCGCCGCTGCAGCAGCCCATCCAGGGTGTTCCTGTTGACATGAACTGGGCTACACCGGTGACCGATCCGAGGGTGGCGGACGGTGGCTCCGGCTTGACGGCTAGTTTGGGTGGTTCCGAGCTTGATTGCATGTGGGGATTCTAA 1089 0.5344 METHYPSSSDNHDAILPPGFRFHPTDEELITYYLLKKVLDNNFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKICGLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKSGSGNGGGSAAISSTCSGSKNKARNIMSSSSNLSLYPAEPGSPSSVYLPPLLDSSPFSAAAAASSTAADSCSNAYDNLNTPREHVSCFSTFSATASNNYSFDLPPAAPPPSVTVDPFARFQRNGGVSFPSLRSLHLQDNLQLPFFIPPPLQQPIQGVPVDMNWATPVTDPRVADGGSGLTASLGGSELDCMWGF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1076 362 Gene3D NAC domain 25 171 IPR036093 GO:0003677|GO:0006355
Alju10g1076 362 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Alju10g1076 362 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
Alju10g1076 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 233 - -
Alju10g1076 362 FunFam NAC domain-containing protein 100-like 25 172 - -
Alju10g1076 362 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1076 Alju-ChrAlju10 10677266 10679263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1076 4 362 NAC Transcription Factor Family AT5G53950 52.880 4.53e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju10g1076 NAM 6.7e-41 No_clan