Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1072 ATGAAAGTAAAGGCGGTGTACACGTGGCGGGAAGTGATTGGCGATCAGTACCCTCCTCAAGTGCTTTCTTTAGCGACGACCATGGCTCCTAGGGATAGACCCGCTTCTCTCGCCGCCTCCAACCCGCCCAACTCTGGTAAGGAGATCCGATACAGAGGTGTCCGCAAGAGGCCGTGGGGGCGTTACGCCGCCGAGATTCGTGATCCCGGCAAGAAAACACGTGTTTGGTTGGGAACTTTTGATACCGCTGAGGAGGCGGCGCGTGCTTACGACGCGGCGGCCAGGGAGTTCCGTGGCGCTAAGGCGAAGACTAATTTCCCTTCTCCGTCTGAACTTCCGAACAACTTCAGTCGCAGCCCTAGCCAGAGCAGCACGCTTGAATCATCGTCTCCGCCGCCAGTTGCTGCTCCCCCGCCGCTAGAACTCTCCCTCGGGATGCTCACTTCTGGCGGCATGTTGGGGTTCCCTGCCATTCCGGTGGCTCGCCCGGTGATGTTTTTTGATGCGTTTGCTCGAGCAGACCGTGTGATGGCAGCTGCCGGCCGCCGTGAGATGTGCGGGTTTGATCGGCCTGTTGCAGAGTTCCGCCGCTCCGTCGGCGACGGTGGTTCCCACAGTGACTCCGATTCGTCCTCTGTCGTGGACTACGAGCGTGCTTCGCCGCGAACAGTCTTAGATCTTGACCTCAATGTCCCTCCGCCGTCGGAAGTTGCCTGA 717 0.5969 MKVKAVYTWREVIGDQYPPQVLSLATTMAPRDRPASLAASNPPNSGKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPSPSELPNNFSRSPSQSSTLESSSPPPVAAPPPLELSLGMLTSGGMLGFPAIPVARPVMFFDAFARADRVMAAAGRREMCGFDRPVAEFRRSVGDGGSHSDSDSSSVVDYERASPRTVLDLDLNVPPPSEVA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1072 238 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 40 215 - -
Alju10g1072 238 MobiDBLite consensus disorder prediction 196 217 - -
Alju10g1072 238 SUPERFAMILY DNA-binding domain 50 107 IPR016177 GO:0003677
Alju10g1072 238 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Alju10g1072 238 FunFam Ethylene-responsive transcription factor 2 50 108 - -
Alju10g1072 238 MobiDBLite consensus disorder prediction 107 130 - -
Alju10g1072 238 CDD AP2 50 107 IPR001471 GO:0003700|GO:0006355
Alju10g1072 238 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Alju10g1072 238 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Alju10g1072 238 Pfam AP2 domain 50 99 IPR001471 GO:0003700|GO:0006355
Alju10g1072 238 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Alju10g1072 238 Gene3D AP2/ERF domain 49 108 IPR036955 GO:0003700|GO:0006355
Alju10g1072 238 MobiDBLite consensus disorder prediction 102 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1072 Alju-ChrAlju10 10621694 10622614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1072 44 168 AP2-EREBP Transcription Factor Family AT3G15210 66.667 2.68e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju10g1072 AP2 2.4e-15 CL0081