Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1065 ATGGCTGAGGCAGCGGGTCTAGCTGAGGCAGCAGGATCAAGATTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAACTCAACAAAGAGGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAGATTGATGACATTCAGACGGAAATTGCTGTTCTATCACAATGTCGTTGTCAATATATTACCGAGTATTACGGCTCCTATCTCCATCAAACTAAACTTTTTATAATAATGGAGTACATGGCTGGAGGCTCTGTAGCTGACCTACTTCAATCAGGCCCACCCCTTGATGAAGTATCAATTGCTTGCATTTTACGTGACTTGTTGCATGCCGTTGATTATTTGCATGTTGAAGGAAAAATTCATAGAGACATCAAAGCGGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGCGTTTCTGCCCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTCATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACAATTGAGATGGCAAAAGGGGAGCCTCCACTTAGTGACCTCCATCCTATGAGAGTGCTTTTCATCATACCACGTGAGAACCCACCACAGCTAGATGAACATTTTTCTCGTCCCATTAAAGAATTCGTTTCATTTTGTTTAAAAAAGCTTCCAGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACATCGTTTTATTCGAACTGCTAGAAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGTATCAAATAAAAGAAGGGGGGACACCTAGAAGTGGTCAAAGAGGGATAGGGGAGCCATCTGATACGATGAAAGTGGCAAGAAATTTAAGAGAAGAAGCTACTCAATCCATTCCCAGTGGTCAGGATAAAACCCGGAAAAATTCTGGATGGGACTTCAGCATTGGTGGATCAAAGGGTACTGGAACTTTTCGCAGTATTGCACGGCCACCTCAGTATAGAGACAAGAAAACAGATGGTTCACAATATCAACTGGACCAAAAGAAGGCAACAGACAGTGGCTATCTTGGGGCATCTTCCTATAGAAATGCTCTTAATGAATCACCAGAAACTTCCCTTGAAGATGATGAATTGTCTGGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCAAAATCATCAATCTTTCATGACCAAAGCTCCCAGTCTAGCAGTTGCTATGGTTCTTTTGAAGATAGTTCTTCCAGTGGAACTATTGTTGTCCGTGGTCAGCATGATGATTATGACTCTTCACAGACACCGAGGTCCAGGCTGGGACTTAATGAGAGAACTGCAAATGCCTCACTTGAAGATAGCGCCTCAAATCTTGAACAGGCAAAGGCTGCTATCCTAAGACCAAGGAAAGGAAATACTCGAGAGAGAGTTATACAGGGAAAGACCAGCAATGATGTGCAGGAAAGCAGAAGAGACCAAGTGACAAGCAGCTCTGATTTCTCAAGATCATCTCGTCTAAACAATGGTCCACAACAGGGAATTTCAAGACTGCGTGATGCTGATGAGGATCAAGACAATGGCAGAATATTGTCTTCCTCTATGGCATTATCTGTTCTACTTATTCCTTCTTTAAAAGAGGCCTTTGCCGATGATCCAGAAGGGTTCACCATACAAGAAATAATCAATTCACTCAAACACATGGAGCACATAAAGTCTGGATCATGTGATGCTCTTGTCAAAAAGTTGCTTCAGCGATTGGCAAGTTCAAAGGAATCTTCGTTGAAGGATCTGCAGGAGCTAGCAGCTCAATTATTCACTACGACCAAGTCAGCTCCTGAAGAATCCCAAAATGCAACTGCAGAAGTTGATGCCAGGAAGAAACAACAGAACAGAGAATTTCATTCAAATAGCAATCTAGGCCCTCTTGCAAGATTTCTTATCTCAAGATGGCAAGGTCAAGCCTAA 2040 0.4245 MAEAAGLAEAAGSRFTSLELIGQGSFGDVYKAFDKELNKEVAIKVIDLDESEDEIDDIQTEIAVLSQCRCQYITEYYGSYLHQTKLFIIMEYMAGGSVADLLQSGPPLDEVSIACILRDLLHAVDYLHVEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTIEMAKGEPPLSDLHPMRVLFIIPRENPPQLDEHFSRPIKEFVSFCLKKLPAERPSAKELLKHRFIRTARKSPKLLERIRERPKYQIKEGGTPRSGQRGIGEPSDTMKVARNLREEATQSIPSGQDKTRKNSGWDFSIGGSKGTGTFRSIARPPQYRDKKTDGSQYQLDQKKATDSGYLGASSYRNALNESPETSLEDDELSGNGSGTVVIRSPKGSKSSIFHDQSSQSSSCYGSFEDSSSSGTIVVRGQHDDYDSSQTPRSRLGLNERTANASLEDSASNLEQAKAAILRPRKGNTRERVIQGKTSNDVQESRRDQVTSSSDFSRSSRLNNGPQQGISRLRDADEDQDNGRILSSSMALSVLLIPSLKEAFADDPEGFTIQEIINSLKHMEHIKSGSCDALVKKLLQRLASSKESSLKDLQELAAQLFTTTKSAPEESQNATAEVDARKKQQNREFHSNSNLGPLARFLISRWQGQA 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1065 679 MobiDBLite consensus disorder prediction 317 480 - -
Alju10g1065 679 Coils Coil 48 68 - -
Alju10g1065 679 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 632 - -
Alju10g1065 679 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1065 679 MobiDBLite consensus disorder prediction 399 480 - -
Alju10g1065 679 MobiDBLite consensus disorder prediction 633 662 - -
Alju10g1065 679 MobiDBLite consensus disorder prediction 493 549 - -
Alju10g1065 679 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1065 679 MobiDBLite consensus disorder prediction 317 345 - -
Alju10g1065 679 MobiDBLite consensus disorder prediction 368 392 - -
Alju10g1065 679 MobiDBLite consensus disorder prediction 280 305 - -
Alju10g1065 679 MobiDBLite consensus disorder prediction 502 539 - -
Alju10g1065 679 Gene3D Transferase(Phosphotransferase) domain 1 12 294 - -
Alju10g1065 679 CDD STKc_MST3_like 13 287 - -
Alju10g1065 679 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Alju10g1065 679 FunFam serine/threonine-protein kinase dst1 isoform X1 12 299 - -
Alju10g1065 679 SUPERFAMILY Protein kinase-like (PK-like) 12 294 IPR011009 -
Alju10g1065 679 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1065 Alju-ChrAlju10 10569418 10578666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1065 1 679 MAP Kinase Kinase Kinase Kinase AT3G15220 60.857 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Alju10g1065 Pkinase 8.2e-67 CL0016