Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1039 ATGAGCCGATCAATCGAGCTGCCGCCGCTGCCCCAATATTCGTTTCGGAAATCCAAGAGGAGTGTATATTCCGGTAGCAATTCGCTTTTGATGGACCCTGACGTTGTGGAAATCCCTCCCCCAATTCATCGCCCTACGAAACTGATGAAACAGAAGGCTATTATTAGTGACGTAATTGACGTAGACAATGATGAGGACTCTTCTGATTTAGTGTTTATTGGTGAAAAAGTTGGTGGAAGCAACAAGGGAAAGGAAATGTCTGGTGATATTTGTTCCCCACCCTCTCTGGAACAATTCGGACCAGCTAGTGGTCTTGCATCTTCCAGTGGTTTTGCTTCAGTATCACATAACGTAATCAATGTTGATGGTCACAGTTCTGATCTATCAAATGATGATGACGACTACAATGATCATTTTGCTGAAGATTTCATGGATGTCGATGAGTACGCCCTGTTACAGGCACACTTTGACCATGTGGATTTACCTGCTGGAATTGAGGCACCCATTCCTTGGATGTCAAATTTTGATCTGGAATTGAAGAATTCTGAAAGTAATTCTTCGAATCCTTGGGGTAATATGCAGTTAGATGCTAAAGGTTCTCATGTGACAGACTTATCTCAGCTGTCATGGGCAATGGAGACTTCTGACCTCATCCAAGAAGCTCCAGTAGGTAGTTCTAGTTCACTAACCAAAGATGTTGCCATTAATCCTCCTCCTCAAAAATTGTCTTCTCAGTTACAAGCTGAAGCTGCTTCTAACAAAAAGAAATCAAATTTTTCACAAGTTGATGGGCTTAAGCTGAACTTGAATCTAGCACTAGGGGTAGATTCATCCAAACCTCATTGGTTCAAAGGACCTTTTGGTCGTAAGAAGAAGCTTTCTATTTTAGGTGAATTTCATAATGATGCTTTAGCACACAAGTCAGAGTCCTTGAAGCTGCCACCTGGAGTTGAACCCCCTTATTGGTGGAAAGCTAAAAGTGCAAAAAAGGCACATGGCAAAGATGTTATGTCCCATTCAAATTTCTTTCCACCTTTTGAAGGGTCATACCATATTCCTGGACTGGAATCAGCAAACTCTAGTATGTGGAAGAATCCTCCTAATCCACCTTTTACAGATCCTTCAGATAATTTAGGTTTTTATTATCCATACGATCCTCTTGATGCCCCTCTTCCACCAATGTTTGGGAATACTTGGTTTCATAATAATGCTAGTGATGAAAAGAATGAAACCACTGCTAACATCCCAGTTGTCACAATCCCTGATGAAGATAGGGAAGAAATCTTGAGGAAATTCCAACAGTTTAAACAGTTTGACACAGTTGAAGACACTTCAGACCATTACTATAATCGCAAGAGTTATTCCTTGAAGCAGCATTCAAAATCTTGGTCCAAGAAAATTCAGGAAGAGTGGAGGATTCTGGAGAAGGATTTGCCTGATACGATATTTGTTAGAGTTTCTGAATCAAGGATGGATATTTTGAGAGCTGTAATTATTGGGGCAGAGGGTACTCCTTATCATGATGGTCTCTACTTTTTTGATGTTTTCTTTCCCACTGGCTACCCCAATGTGCCACCGGAGGTCCACTACCACTCAGGTGGTGTTAGGATCAACCCAAATTTGTATAACTGTGGCAAAGTATGCCTTAGTCTGCTCAATACTTGGTCTGGCAATAAGAATGAGAAGTGGCTTCCTGGTGTTTCAACAATTCTACAGGTTCTTGTTTCTATACAAGGTTTAATCTTGAATGCAAAGCCTTATTTTAATGAGCCTGGTTTTGCTCATATGAGTGGTTCTGCCTCGGGTGAAATGAGGTCCCTGCAGTACAACGAGGATGCATTTCTTCTGTCATTGAAGACAATGATGTACGTGATGAAAAAGCCTCCAAAGCATTTTGAGGACTTTGTCGCAGGGCATTTCTGCAACCGGGCTTGCGATATCTTGGTGGCATGTAAAGCATACATGGATGGTGCTCAAGTTGGCTGTTTGGTCAAAGGTGGGGTGCAGGATGTTGACGCGGGTGACCGGAGCTGCTCGAAGCCGTTTAAGGATACTTTAACTGGATTTGTGAATAGGCTTGTTGGAGAATTTTCCAAAGTTGGAGCCAAGGACTGCGAGAAATTCTTGCCACAGGTGGCGGCTACAACCGGGAACGTGCAGGCAGGTTGTGACCCTGATGTTGCTGCTCCTGCTACCTGA 2199 0.4266 MSRSIELPPLPQYSFRKSKRSVYSGSNSLLMDPDVVEIPPPIHRPTKLMKQKAIISDVIDVDNDEDSSDLVFIGEKVGGSNKGKEMSGDICSPPSLEQFGPASGLASSSGFASVSHNVINVDGHSSDLSNDDDDYNDHFAEDFMDVDEYALLQAHFDHVDLPAGIEAPIPWMSNFDLELKNSESNSSNPWGNMQLDAKGSHVTDLSQLSWAMETSDLIQEAPVGSSSSLTKDVAINPPPQKLSSQLQAEAASNKKKSNFSQVDGLKLNLNLALGVDSSKPHWFKGPFGRKKKLSILGEFHNDALAHKSESLKLPPGVEPPYWWKAKSAKKAHGKDVMSHSNFFPPFEGSYHIPGLESANSSMWKNPPNPPFTDPSDNLGFYYPYDPLDAPLPPMFGNTWFHNNASDEKNETTANIPVVTIPDEDREEILRKFQQFKQFDTVEDTSDHYYNRKSYSLKQHSKSWSKKIQEEWRILEKDLPDTIFVRVSESRMDILRAVIIGAEGTPYHDGLYFFDVFFPTGYPNVPPEVHYHSGGVRINPNLYNCGKVCLSLLNTWSGNKNEKWLPGVSTILQVLVSIQGLILNAKPYFNEPGFAHMSGSASGEMRSLQYNEDAFLLSLKTMMYVMKKPPKHFEDFVAGHFCNRACDILVACKAYMDGAQVGCLVKGGVQDVDAGDRSCSKPFKDTLTGFVNRLVGEFSKVGAKDCEKFLPQVAATTGNVQAGCDPDVAAPAT 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1039 732 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 462 622 IPR000608 -
Alju10g1039 732 FunFam Probable ubiquitin-conjugating enzyme E2 23 425 701 - -
Alju10g1039 732 Pfam Ubiquitin-conjugating enzyme 467 589 IPR000608 -
Alju10g1039 732 CDD UBCc 464 591 IPR000608 -
Alju10g1039 732 SUPERFAMILY UBC-like 451 631 IPR016135 -
Alju10g1039 732 Gene3D Ubiquitin Conjugating Enzyme 422 694 IPR016135 -
Alju10g1039 732 SMART ubc_7 465 622 - -
Alju10g1039 732 MobiDBLite consensus disorder prediction 228 257 - -
Alju10g1039 732 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 201 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1039 Alju-ChrAlju10 10184794 10190739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1039 401 705 Miscellaneous Gene Families AT2G33770 47.634 3.47e-86 289