Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1032 ATGTTATTAACTTCCTTTTTGTCTCTCTTGTGCCATTCTCTTTCTCACAGGGAAAATTGCTGTAGAACTAGAAAAACAAAAATGGAACCGGCGTGCTCTGACCGTAACGGGGGGTTCTCAAGTAAGAAAAATTCGAAGTCAATTTCTTCACAGACAAGCATAACTGATAGTGACAACAATGGTTGCTTTGAGTGCAATATATGCTTAGATTCAGCTCATGATCCTGTGGTCACACTCTGTGGTCACCTGTACTGCTGGTCTTGCATATTCAGGTGGCTTCAAGTTCAACACTCTTCTTCTGATGATGATGATGATGAATCAGACCAGCTGCAACCTACATGCCCAGTTTGTAAAGCCGATCTCTCTCATACTTCATTAGTCCCTCTTTATGGCCGAGGCACTCATAGTTCGGATTCTGAGCTCAAGAAAACCCGGACGGATATAGGAATACCCCGTAGACCGCCTCCTAAAGGCTCAAATGCTATGTTAAATTCTACTAGTGCATCTCCTTCACAGCAATACTTGCCTCGCCTTTATGGAGGATATGGTGTTAGTAGATCACCATATCTTGGAGTTGCAGCCCTGACTAGTCTCTCTTATCCTATTATTGATATGTTCAGGGAAATGGTCTTTGCAAGGACCTTTGGGAGTTCTGAGTCTAATTCATTGGCGTATCGCTATGTTGGTTACTACCCTCATAATATTGGAAGTGATAGTCAGAGAATGAGAAGGCAGGAAATGCTCATGGACAAGTCTCTAAGCAGAGTATCTTTCTTTCTCCTCTGTTGTGTCATTCTGTGTCTTCTCTTGTTCTGA 816 0.4265 MLLTSFLSLLCHSLSHRENCCRTRKTKMEPACSDRNGGFSSKKNSKSISSQTSITDSDNNGCFECNICLDSAHDPVVTLCGHLYCWSCIFRWLQVQHSSSDDDDDESDQLQPTCPVCKADLSHTSLVPLYGRGTHSSDSELKKTRTDIGIPRRPPPKGSNAMLNSTSASPSQQYLPRLYGGYGVSRSPYLGVAALTSLSYPIIDMFREMVFARTFGSSESNSLAYRYVGYYPHNIGSDSQRMRRQEMLMDKSLSRVSFFLLCCVILCLLLF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1032 271 MobiDBLite consensus disorder prediction 136 150 - -
Alju10g1032 271 ProSiteProfiles Zinc finger RING-type profile. 65 118 IPR001841 -
Alju10g1032 271 Pfam RING-type zinc-finger 65 96 IPR027370 -
Alju10g1032 271 MobiDBLite consensus disorder prediction 37 56 - -
Alju10g1032 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 147 IPR013083 -
Alju10g1032 271 MobiDBLite consensus disorder prediction 31 56 - -
Alju10g1032 271 MobiDBLite consensus disorder prediction 132 169 - -
Alju10g1032 271 ProSitePatterns Zinc finger RING-type signature. 80 89 IPR017907 -
Alju10g1032 271 SMART ring_2 65 117 IPR001841 -
Alju10g1032 271 SUPERFAMILY RING/U-box 61 130 - -
Alju10g1032 271 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 42 268 IPR045103 GO:0005783|GO:0006511|GO:0061630
Alju10g1032 271 CDD RING-HC_RNF5-like 63 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1032 Alju-ChrAlju10 10137377 10140451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1032 36 257 C3H Transcription Factor Family AT4G27470 41.176 2.20e-49 161