Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1010 ATGGGAGTTCCGGCGACTGACCTGCTTGCCCAACTGAGTTTGCCTCCGGGTTTTCGGTTTTACCCAACCGACGAGGAGCTTCTGGTTCAATATCTATGCCGGAAAGTAGCCGGCCACCATTTCTCTCTGCAAATTATAGGCGAAATCGACTTGTACAAGTTCGACCCATGGGTCCTACCGAGCAAAGCGATTTTCGGTGAGAAAGAATGGTACTTTTTCAGCCCCAGAGACCGGAAGTACCCGAATGGGTCTCGACCCAACAGAGTTGCCGGGTCTGGATACTGGAAAGCCACCGGAACCGATAAGATCATTACCACCGAAGGCCGGAAGGTTGGCATAAAAAAATCTCTGGTTTTCTACGTAGGTAAAGCACCCAAAGGAATTAAAACCAATTGGATCATGCACGAGTATCGCCTTCTCGAAAATTCCAGAAAGAATGGTAGCTCCAAGCTGGATGATTGGGTTCTGTGTCGAATTTATAAGAAGAATTCGAGCGCACAGAAGAATATGCTTTCAAGCGTTTCAAGTAAAGATTATAGTTATAGCAACGGATCTTCTCCATCGTCATCGTCGCACTTGGACGACATGCTGGAATCCTTGCCGGAGATCGAGGACCAGAGTTTCACCCTGCCGCGTATGAACTCGCTGAAGGCGCTACCGCAAGACGAGAAACTCAATTTCCATAATCTTGGCGCCGGAAATCTTGTCGAGTGGGCCAACCCGGCGGTGATTAACTCGGTACCCGACTTCGTTCCGGGAAGTCAGGGTCAGTGGATGGTGAATTATAACCCGGGAAATGACCATTATGTCCCTTCCATCTCTCAGCTCTGCCACACGGCGTTGCCGGCACCGGCGGCGGAGAAGCTCGGGAACTCAATGAAGGAGGAGGTTCAGAGCGGAGGGAGGAGCCGGGTGGAGAATTCTGGCGGGTACTTTCAGGCGAATTCGAATGTGGGATTCTCGAACTCCATTGACCCGTATGTATTCAAATACCCGAGTCAGACAATCGGGTTCGGATCTCAACCATGA 1029 0.5053 MGVPATDLLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKSLVFYVGKAPKGIKTNWIMHEYRLLENSRKNGSSKLDDWVLCRIYKKNSSAQKNMLSSVSSKDYSYSNGSSPSSSSHLDDMLESLPEIEDQSFTLPRMNSLKALPQDEKLNFHNLGAGNLVEWANPAVINSVPDFVPGSQGQWMVNYNPGNDHYVPSISQLCHTALPAPAAEKLGNSMKEEVQSGGRSRVENSGGYFQANSNVGFSNSIDPYVFKYPSQTIGFGSQP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1010 342 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Alju10g1010 342 MobiDBLite consensus disorder prediction 176 195 - -
Alju10g1010 342 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Alju10g1010 342 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 204 - -
Alju10g1010 342 FunFam NAC domain-containing protein 72-like 23 167 - -
Alju10g1010 342 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
Alju10g1010 342 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1010 Alju-ChrAlju10 9879632 9880854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1010 1 330 NAC Transcription Factor Family AT4G27410 56.571 1.62e-123 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju10g1010 NAM 2.2e-36 No_clan