Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1009 ATGGACAGCACTGAATCGTCGACCGGTTCGCAGCAGCCGAATCTTCCGCCGGGTTTCCGGTTCCACCCGACCGACGAAGAGCTCGTCGTTCATTACCTCAAGAAGAAGGTGTCCTCTGCTCCCCTCCCCGTCGCGATCATCGCCGAGGTCAATCTCTACAAGTTCGATCCGTGGGAACTCCCAGCTAAGGCAGCGTTTGGAGAGCAGGAATGGTACTTCTTTAGCCCGAGGGATAGGAAGTACCCGAACGGAGCTCGGCCAAACAGGGCAGCGACATCTGGGTATTGGAAGGCAACAGGAACTGATAAGCCAGTGTTGACATCTAATGGAAACCAGAAGGTTGGGGTGAAGAAAGCTTTGGTTTTTTATGGAGGGAAACCTCCAAGAGGAATCAAAACTAACTGGATCATGCATGAATATAGGCTTGCTGATAATAAGCCTAACAATAAACCTCCTGGTTGTGACTTGGGCAACAAGAAAAACTCTCTCCGGCTAGATGATTGGGTGCTGTGTCGAATATACAAGAAGAGCAACACGCACAGATCTCCTATGGATCACGACGATTCATCGATTGACGATATGATTGGAGGGGTTCCTCCGTCCATCAACGTTGGACAGATGAACGGCAGATTCCATCTTTCTAAGATGCCAACAACCTACGCCGCCGTAGGAGGATCGTTAATGCTGGACACAAACAATGATCATAACTTACTGGAAGGGGTTGTTGCTGTTACCAACAACAACAACAATGGAAGAATCAACACACAGTTTCCTAGTTTGGTCCCTACTATGGCTTCTTCAAACCTTACTGCTTCTGTTACAACCCTACCTTCGAAACGAACACTCCCTTCTCTGTATTGGAGCCCCGACGAGGATTTCGCCGGAACCTCCTCGAAAAGATTGAACCTGGACAATAATGAGAACGGTGGGTGCAGTGGCGGCGGAGGCGGCGGCGGGGTTACTACGGCTGCTAGTTCTATTGCTTCTCTGCTAAACGAGCTTCCACAGACACCTTCAATGGTGGGATCTATAGATGGAATTTTTCGGGGACAGTATCAGATTCCTGGAATGCATTGGTACGCTTAA 1086 0.4936 MDSTESSTGSQQPNLPPGFRFHPTDEELVVHYLKKKVSSAPLPVAIIAEVNLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSNGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMDHDDSSIDDMIGGVPPSINVGQMNGRFHLSKMPTTYAAVGGSLMLDTNNDHNLLEGVVAVTNNNNNGRINTQFPSLVPTMASSNLTASVTTLPSKRTLPSLYWSPDEDFAGTSSKRLNLDNNENGGCSGGGGGGGVTTAASSIASLLNELPQTPSMVGSIDGIFRGQYQIPGMHWYA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1009 361 PANTHER NAC TRANSCRIPTION FACTOR 56 15 194 - -
Alju10g1009 361 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Alju10g1009 361 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Alju10g1009 361 FunFam NAC transcription factor 56 24 181 - -
Alju10g1009 361 MobiDBLite consensus disorder prediction 1 20 - -
Alju10g1009 361 MobiDBLite consensus disorder prediction 1 17 - -
Alju10g1009 361 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Alju10g1009 361 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1009 Alju-ChrAlju10 9849075 9850767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1009 19 361 NAC Transcription Factor Family AT3G15510 53.005 2.74e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju10g1009 NAM 6.7e-40 No_clan