Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1002 ATGGCTTCCTCACTTTTCAAGTTCACTATCTTCCTCTTCATTGCCCTCGTCTTTTTTTCTCCCAGCGAGAATAATATCGCAGAAGCAAAACTTTGTGGAAAACTTAGCCAAACATTTACTGGGATTTGCATCCGCAAGAAACCCTGTAAATCTGCATGTTCAAAAGAGGGTGCTGTTGACGGAAGTTGCCACACTCATGGTTTTGGACGTGCTTGCTTTTGCTACTTCAAGTGCTGA 237 0.4304 MASSLFKFTIFLFIALVFFSPSENNIAEAKLCGKLSQTFTGICIRKKPCKSACSKEGAVDGSCHTHGFGRACFCYFKC 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1002 78 PANTHER DEFENSIN-LIKE PROTEIN 1 1 78 - -
Alju10g1002 78 SUPERFAMILY Scorpion toxin-like 29 78 IPR036574 -
Alju10g1002 78 ProSitePatterns Gamma-thionins family signature. 30 53 IPR008176 GO:0006952
Alju10g1002 78 Gene3D - 29 78 IPR036574 -
Alju10g1002 78 Pfam Gamma-thionin family 31 78 - -
Alju10g1002 78 CDD Knot1 41 75 IPR003614 GO:0006952
Alju10g1002 78 SMART gth_4 31 78 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1002 Alju-ChrAlju10 9667846 9668302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1002 1 78 Plant Defensins Gene Families AT1G19610 37.975 1.49e-12 55.5