Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0986 ATGCTTGAATCGCTCCAGCGGAGAGACGAAGAAGAGAATAAGCCAAAGGACTTGCCGCCGGCATTGCCAGCTCGTCCGACCTCCAAAGCTCGGCTTCCCTCAGCGAGAAGGTCATTGCCGAATAACTTCAAGGTTAATGGAGATCCTGGCGAGACAGAATGCCTTCCGAACGGATTTCATGATGCGAACGAAGAGACTAAGAGGAAAGATACAGTTGATTTGGGACACAAGAGAAACGGAAGCCTCGGGAGCAAGAAGTTGAAGAGGGATGTGGAATCGCCTTACGCCATCGCATCAGAAGAGAACCAGAGCGACCAATTATCATCGAAGAGTCGAGAATACTACTCGGATGATAACGTTACTTATTTCATCAAGAAGAAACTTCATGTTTGGTGTAGGCAACCAAATGGGCACTGGGGACTAGGGAAGGTACAATCAACTTCAAAAGAAGAAGCTTTTGTTTTACTCACAAATGGAAATGTTATGAAAGTGGCCAGATCAGAGCTCCTACCAGCTAATCCAGATATTTTAAAAGGCGTCAATGATCTCAAACAGCTGAGTTATCTGAATGAGCCATCAGTTCTCCACACTCTTCGTTTTAGATATTCTCAAGAACTGATTTATAGTAAAGCAGGACCCATTTTAATAGCATTCAATCCCTTCAAAGATGTCCAGATTTGTGGAAATGATCATGCCACAACTTATAGGCAGAGATGCATGACTGACCCACATGTTTATGCCGTGGCAAATTCAGCTTATAATGAGATGATGAGAGATAAAGTAAATCAGTCCATCATCATGAGTGGTCAGAGTGGATCAGGGAAGACAGAAACAGCAAAAATTGCTATGCAATATTTGGCTGCTCTGGGTGGTGAAAGCTGTGGCATAGAAAATAAAGCCCTTCAGACACATTTTATTCTAGAAGCTTTTGGGAATGCAAAAACACCAAGGCACAACAATTCTAGCAGATTTGGGAAGTTAATTGAGATTCATTTCACTGCAGCAGGGAAAATAGGTGGAGCTAAAATTCAAACCTTCATGTTACAAAAGTCAAGAGTTGTTCAGCTGACCAGTGGTGAGAGGTCATTTCACATCTTTTATCAACTTTGTGCTGGATCTTTACCTGGTCTTAAAGAGAGGCTGAATCTTAGAGAGGCCAGCGAATATAAATATCTTAATCAGAGTGACTGTATGACAGTAGATGGTGTTGATGATGCTAAAATGTTTAATAAGCTGCTGAAAGCGCTGGATGTTGTTCAAATTTGCAAAGAGGATCAAGAGCAATTATTTAAAATCCTTGCTGCAATATTATGGCTTGGAAATGTATCATTTCAAATATCTGACAATGAAAATCATGTTGTGGTGGTGGATGATGAAGCTGTCACCATTACAGCCATGCTGATGGGTTGCAGTTCCCAAGAGTTAATAGTAACTTTATCTACTTGTAAAGTCCAAGCAGGCAAGGATACTATTGCTAAAAGTTTGACACTGAAGCAGGCAATTGAAACAAGAGATGCACTGGCACAATTTATGTATGCTAGTGTGTTTGAGTGGCTCATAGAAAAAATTAACAAGTCACTTGGAGTTGGCAAACGGCATACCGGGAGATCCATAAATATCCTTGATATTTGTGGATTTGAGTCTTTCAAGAAAAACAGCTTTGAACAATTTTGTGTGAATTATGCTAACGAGAGGCTTCAACAACATTTCAATCGGCACATGTTTAAACTTGAGCTGGAGAACTATGAAATGGATGGTGTTCATTGGACTAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCATCAGGGATACTTTCTTTGTTGGATGAGGAATCAAATTTGCCCAAGGCCACTGATCTCACGTTTGCCAACAAACTTAAACAGCACCTGAATGCTAATCCTTGCTTTAAAGGAGAAAGAGGGAGGGCTTTTGGTGTTCGACACTTTGCAGGAGAGGTTTTGTATGATACAAACGGCTTTCTACAGCAGAACAAAGATCTGCTGCCTTCTGAATACATACAACTCCTGGCATCATGTAGCTGTCAACTGCTGCAGTTGTTCTCGAAAATGCTTAGCCAAACACAGAAACAACTGAATTCGTTACAACTAGGTGCATTAGACTCGCAGCACAGTGTGGGTGCAAAGCTCAAGGGTCAATTGTTTGACTTAATGCACCAATTGGAGAACACCACACCTCATTTTATTCACTGCATAAGGCCAAACACTAAGCAGCTTCCTGGCGTATTTGATGAAGATCTTGTCATGCAACAACTCCGTTGCTGTGGAGTCTTAGAGGCTGTTAGACTTTCAAGGATTGGATATCCTATCCAAATGACACATCAAGAGTTTTCTGAAAGGTATAGGTTTCTGCTTTCAGAGCCCAATGTATTTCATGATCCACTGAGCATCTCAGTTGCTGTATTGCGACAATTTAATATCCCTCCTGAAATGTATCAGTTTGGCTACGCCAAAGTGCATTTGCGAAAAGGGCAGATTGGTGCATTGGAGGATAAAAGAAAACAGGTTATGCAAGGAATACTTCAGGTTCAAAAATGGTTCCGTGGTCATAAAGCCCGTCAATATTTTCGTGAACTTAAGAATGGAGTGACGAAGTTGCAATCATTTGCTCATGGAGAAATTTTGAGGACCAAATATGGTATAGTTGAAAAGTCTTCGATGACTATTGATTGTAAAAATTTTGAGGATACTGAGGCAATCATAGTACTACAGTCAGTAATTCGTGGCTGGCTGGCTAGGAGGCGGAACGCTAATGGTTTGCATAAGGTGAAGAAACACCCTAATAACGAAAAACTTCAGCGATATTCTCGTGTGAAGATGCTAGATATGAAGGAAGCGTCCAGAGAGCAGGTTCAGAATTTGCCATCAGCCTTAGAAGAACTCCGAAGGCGGGTGCTTAAGGCCGAGGCAACTCTTGAACAAAAGGAAGAGGAAAATACTGCATTGAGGGAGCAGCTGAGACAAAACGAAACAAAATGGATTGAATATGAGGCGAAGATGAAATCAATGGAGGAGACATGGCAAAAACAGATGGCGTCTTTGCAAGTGAGTCTTGCAGCTGCTAGAAAGAGCCTTGCTTCTGACAACAACACTGCTTATCCTGGTAGACAAGAAGCTCTGTCACCTCGTTACAATGATTCTGAAGATTTTAATTCTGTAATATCTAGAACTCCTGGCGGGAGCACACCTATCAAGTTTTCTAGCTCTCTCTCCGTCTCTGATTCTGGAGCGGCTGGAGCGGCAGGAAGAGAAGTTAATGGTACTCTTTCTGCAGTCAGCAATCTGATGAGGGAATTCGAACAGAGAAGACAGACTTTTGATTGTGAAGCCAGGGCTCTGCTCAATGCCAAGTCCGGGCAGTCTGCTATCATAAATCCGGATGAAGAATTTAGGAGACTTAAACATAGGTTTGAGGGATGGAAGAAAGAATACAAGTTTAGATTACGGGAGACAAAAGCAAGACTTCATAAAGTAGGGAATTCTGAAGGGGAAAAGAGCCGTCGGAGATGGTGGGGGAAGTTAAGCTCAAGAGCCTCATAG 3579 0.4186 MLESLQRRDEEENKPKDLPPALPARPTSKARLPSARRSLPNNFKVNGDPGETECLPNGFHDANEETKRKDTVDLGHKRNGSLGSKKLKRDVESPYAIASEENQSDQLSSKSREYYSDDNVTYFIKKKLHVWCRQPNGHWGLGKVQSTSKEEAFVLLTNGNVMKVARSELLPANPDILKGVNDLKQLSYLNEPSVLHTLRFRYSQELIYSKAGPILIAFNPFKDVQICGNDHATTYRQRCMTDPHVYAVANSAYNEMMRDKVNQSIIMSGQSGSGKTETAKIAMQYLAALGGESCGIENKALQTHFILEAFGNAKTPRHNNSSRFGKLIEIHFTAAGKIGGAKIQTFMLQKSRVVQLTSGERSFHIFYQLCAGSLPGLKERLNLREASEYKYLNQSDCMTVDGVDDAKMFNKLLKALDVVQICKEDQEQLFKILAAILWLGNVSFQISDNENHVVVVDDEAVTITAMLMGCSSQELIVTLSTCKVQAGKDTIAKSLTLKQAIETRDALAQFMYASVFEWLIEKINKSLGVGKRHTGRSINILDICGFESFKKNSFEQFCVNYANERLQQHFNRHMFKLELENYEMDGVHWTKVDFEDNQECLDLFEKKPSGILSLLDEESNLPKATDLTFANKLKQHLNANPCFKGERGRAFGVRHFAGEVLYDTNGFLQQNKDLLPSEYIQLLASCSCQLLQLFSKMLSQTQKQLNSLQLGALDSQHSVGAKLKGQLFDLMHQLENTTPHFIHCIRPNTKQLPGVFDEDLVMQQLRCCGVLEAVRLSRIGYPIQMTHQEFSERYRFLLSEPNVFHDPLSISVAVLRQFNIPPEMYQFGYAKVHLRKGQIGALEDKRKQVMQGILQVQKWFRGHKARQYFRELKNGVTKLQSFAHGEILRTKYGIVEKSSMTIDCKNFEDTEAIIVLQSVIRGWLARRRNANGLHKVKKHPNNEKLQRYSRVKMLDMKEASREQVQNLPSALEELRRRVLKAEATLEQKEEENTALREQLRQNETKWIEYEAKMKSMEETWQKQMASLQVSLAAARKSLASDNNTAYPGRQEALSPRYNDSEDFNSVISRTPGGSTPIKFSSSLSVSDSGAAGAAGREVNGTLSAVSNLMREFEQRRQTFDCEARALLNAKSGQSAIINPDEEFRRLKHRFEGWKKEYKFRLRETKARLHKVGNSEGEKSRRRWWGKLSSRAS 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0986 1192 Pfam Myosin head (motor domain) 180 835 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju10g0986 1192 Gene3D Kinesin motor domain 182 775 IPR036961 -
Alju10g0986 1192 MobiDBLite consensus disorder prediction 1169 1184 - -
Alju10g0986 1192 Gene3D - 547 737 - -
Alju10g0986 1192 FunFam Myosin heavy chain 361 417 - -
Alju10g0986 1192 MobiDBLite consensus disorder prediction 1 88 - -
Alju10g0986 1192 Coils Coil 957 1005 - -
Alju10g0986 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 929 IPR027417 -
Alju10g0986 1192 SMART iq_5 908 930 IPR000048 GO:0005515
Alju10g0986 1192 SMART iq_5 871 893 IPR000048 GO:0005515
Alju10g0986 1192 SMART iq_5 848 870 IPR000048 GO:0005515
Alju10g0986 1192 Gene3D Myosin VI head, motor domain, U50 subdomain 422 715 - -
Alju10g0986 1192 Gene3D - 780 848 - -
Alju10g0986 1192 MobiDBLite consensus disorder prediction 1 18 - -
Alju10g0986 1192 ProSiteProfiles Myosin motor domain profile. 178 847 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju10g0986 1192 MobiDBLite consensus disorder prediction 58 88 - -
Alju10g0986 1192 PANTHER MYOSIN 171 1184 - -
Alju10g0986 1192 Gene3D - 851 939 - -
Alju10g0986 1192 ProSiteProfiles IQ motif profile. 909 938 IPR000048 GO:0005515
Alju10g0986 1192 Gene3D - 361 420 - -
Alju10g0986 1192 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 125 174 IPR004009 GO:0003774|GO:0005524|GO:0016459
Alju10g0986 1192 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju10g0986 1192 PRINTS Myosin heavy chain signature 590 618 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju10g0986 1192 PRINTS Myosin heavy chain signature 208 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju10g0986 1192 PRINTS Myosin heavy chain signature 262 287 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju10g0986 1192 PRINTS Myosin heavy chain signature 537 565 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju10g0986 1192 SMART MYSc_2a 172 848 IPR001609 GO:0003774|GO:0005524|GO:0016459
Alju10g0986 1192 ProSiteProfiles IQ motif profile. 850 878 IPR000048 GO:0005515
Alju10g0986 1192 CDD MYSc_Myo8 192 835 IPR036022 -
Alju10g0986 1192 Pfam IQ calmodulin-binding motif 853 870 IPR000048 GO:0005515
Alju10g0986 1192 Pfam IQ calmodulin-binding motif 910 928 IPR000048 GO:0005515
Alju10g0986 1192 MobiDBLite consensus disorder prediction 1169 1192 - -
Alju10g0986 1192 MobiDBLite consensus disorder prediction 1040 1060 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0986 Alju-ChrAlju10 9424344 9434690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0986 1 1186 Myosins gene family AT5G54280 58.886 0.0 1413