Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0981 ATGAACGGGAAGGCCAACGTTTCTAAAGAGCTCAACGCAAAGCATAAAAAGATATTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCAGACTGCAAAGCTAAAGGTCCAAGGTGGGCTAGTGTGAACCTAGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTACATATTTCGAAGGTTCGGTCTGCAACTCTTGACACATGGCTTCCAGAGCAGGTTGCATTCATTCAATCCATGGGAAATGAGAAGGCTAATTCTTACTGGGAGGCAGAGCTACCCCCAAATTATGATAGAGTTGGAATCGAGAATTTTATTCGTGCAAAATATGAAGAGAAGAGATGGATTCCGAAGGATGGGAAAGTAAAATCACCTTCTAGGCAGCAGGAAGAGAGGACTACTTCAAATTGGCAGAGGCCTGCAGAAAGAAGTGGGCATGGTTATACGTCTGCTTCTGAGAACACTTTTCATGAAAGAAAGAAAATTCAGGCAACAAATACAATTCTTGGAACAAGAAATAATGTCCTTGCTCCTCCAAAAGTACCTGAACAGGTAACTCCTGCAAAACCTCAGCATGTAGAGAAAGTGGAACCTGTGGCTCCAAAACCACAAACTGAATCAGCTAAGCAAGCTACTGTCATGGCTCAGAGTACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACTTGTTATCCATGGATGCCCCAGGTGAAAATGGCTCAGATGAAGCTGGTACTACTACTGACGATAGTAACTGGGAAGGCTTTGAGTCCGCTGCAGAAGCATCAACAGCTGAGAAGACTGGTTCCACAAAAGCAGCGGAGAGCACTCCCAAATCTAATTCTGGAATTGAGGATCTATTCAAGGATTCACCTTCAGTGACTCCTTTAGTTCCAGTAAAACCTCAGAAAGATTTAAAGAATGACATCATGAGCCTCTTTGAAAAGTCCAACATGGTCTCTCCATTTTCTGCACACCAGCAACAGCTTGCCATGCTTGCACAGCAACAGTCCCTTCTAATGGCTGCTTCAGCCAACTCTGCTGGGGGGAACCCCAAGTATCCCGGTAGTATACAGCAACCTGGACTGAATGGATCCAATATTCCTGTCCCAAGTTGGCCAGCTGCCGGTTACTCAGTTCCTGGAGTAATGCCGACGGCTGGTCAGGGAGAGCTGCAGAAACTAATGCAGACTAGGGGCATGACTCCAGCACATCCAACGTTGAGTTCTGTGCAGTATCCAACATCTAGCTTTTATACAATGGGACCGGTTAGACCCGTTAATGGCGTCACGGCCATGGGAGTGAGTACAGTTCCACCGGCCGCTTCAATGTCGTCATCAACCTCCTCACAGGCACCAAAGGACTATGATTTCTCCTCTTTAACACAATGGATGTTTACCAAACCCTGA 1434 0.4582 MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWIPKDGKVKSPSRQQEERTTSNWQRPAERSGHGYTSASENTFHERKKIQATNTILGTRNNVLAPPKVPEQVTPAKPQHVEKVEPVAPKPQTESAKQATVMAQSTPPKVDYATDLFNLLSMDAPGENGSDEAGTTTDDSNWEGFESAAEASTAEKTGSTKAAESTPKSNSGIEDLFKDSPSVTPLVPVKPQKDLKNDIMSLFEKSNMVSPFSAHQQQLAMLAQQQSLLMAASANSAGGNPKYPGSIQQPGLNGSNIPVPSWPAAGYSVPGVMPTAGQGELQKLMQTRGMTPAHPTLSSVQYPTSSFYTMGPVRPVNGVTAMGVSTVPPAASMSSSTSSQAPKDYDFSSLTQWMFTKP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0981 477 CDD ArfGap 19 117 - -
Alju10g0981 477 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Alju10g0981 477 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Alju10g0981 477 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Alju10g0981 477 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Alju10g0981 477 MobiDBLite consensus disorder prediction 126 226 - -
Alju10g0981 477 Pfam Putative GTPase activating protein for Arf 17 124 IPR001164 GO:0005096
Alju10g0981 477 MobiDBLite consensus disorder prediction 136 159 - -
Alju10g0981 477 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Alju10g0981 477 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Alju10g0981 477 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Alju10g0981 477 MobiDBLite consensus disorder prediction 212 226 - -
Alju10g0981 477 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Alju10g0981 477 MobiDBLite consensus disorder prediction 240 308 - -
Alju10g0981 477 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 476 IPR044520 GO:0005096
Alju10g0981 477 MobiDBLite consensus disorder prediction 249 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0981 Alju-ChrAlju10 9379129 9388324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0981 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 3.02e-30 118