Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0955 ATGCAAGGTTTTGATGAACACAATAATGGAGAATTTCAGAGTTCTGTATCTTTACTGCTTGCTGCTCTGCTTTATAAAACCCCTCACCTCACAAGACATCATCGCCGCAGTGGTAATAGTGGTAACTTGGAGCAACTCTTGTGGCAGAGTTTTGACCACCCTTGTGACACCTTAATGCCAGGAATGAAGCTTGGGTGGGATCAAGAAACTGGTTTGGATAGATTTCTGTCATCTTGGAAAGGTTCAGATGATCCTGGTCGGGGAGATTATGCAATCAAAATAGACCGTAGAGGGTACCCACAAAGCTTTCAACTGGAAGGTTCTAAGGTGATGGTTAGAACTGGTTCATGGAATGGCTTATCTTTCACGGGGCTTGCAAATCATATTCTGAATCCTCTAATAAATGGTGAGTTTGTGATGAATGAAAAAGAGGTATATTACAAGTTTGATCTTATAAATAATTCAGTCTTCTCCAGATATGTAATGAACCCTTCAGGCATAGGACAGCGTTTTAATTGGGTAATTCAAACAAGCAGCTGGCGGGTAACGAACACTGGTAGTGGTACATCTGACACGTGTTCTAATTATGCCTTATGTGGTGCAAATTCTATCTGTAACATTAGTAACAATCCTGTTTGTGAATGCCTGAGAGGGTATGAACCCAAGAATTTTAAGGAATGGAATGTGTCTGATTGGAATGGTGGCTGCACTAGAAGGGTTTCTTTGGACTGTGGTGGTGGTGATGGATTTAAGCAGTATACAGGCATCAAGTTGCCAGACACTTCATCTTCATGGTATAACATGACAATGGACCTCGAGGAATGTAAGAAAACATGTCTGCAAAACTGTTCTTGTGCAGCTTATTCGAATTTGGATATACGAGGTGAAGGAAGTGGCTGCTTGTTATGGTTTGATCGGCTGTTGGACATGAGACAATTTCCTGCAGGGGGGCAAGACCTCTATGTACGAGTTCCTGCTTTTGAGCTAGATAGTTTTAGGGATGAAGGCCGTGGAAGTATTGGCAAGAAGAAGTTAGTAGGAATTGCGTTTGGCTGTGCAATATTTGTAACGAGTATCATGATTCTTGGATTGACTTTAATTGCAAAGAAAAGGAAACTAAGAAATTCGGGGAAGGAAGACATGGGGATTGCAACATTTGATTTGTCAGTCATTATCAAGGCTACTGATAATTTTTCTACAGTTAATAAATTGGGTGAAGGTGGTTTTGGGACAGTATATAAGGGTACTTTGGAAGATGGACAAGAGTTGGCTGTGAAAAAGCTATCAACAAAATCTGTCCAAGGGTTTGAAGAGTTGAAAAATGAAGTCTTGCTGATAGCAAAACTTCAGCACCGTAATCTTGTAAAGCTTATTGGTTGCTGCATTGAAGGAGAAGAGAAGCTGTTGATTTATGAATACATGCCAAACAAGAGCTTGGACTACTTTATTTTTGATTTTGGTCTGGCTCGCATATTTTGGGATGATCAGGTTGAAGCCAACACTAACAAAGTTGTCGGAACATATGGATATATGCCTCCGGAATATGCCGCATACGGACAATTTTCAATGAAATCTGATGTGTTCAGCTTTGGTGTAATTGTGCTAGAAATTGTTAGTGGGAAGAAGAACAGAAGATTTTTAGATCCAGAATACAACCTTAATCTTCTTGGATATGCTTGGAGACTGTGGATGGAAGGAAGACCAATGGAACTATTGGATGTATGTTTAAACGAAAGTTGCATTCAGTCTGAAGTGATACGATGTATACAGGTAGGACTATTATGTGTGCAACAAAGAGCTGAAGACAGGCCTGATATGTCAACTGTAGTTCTAATGTTAAATGGTGAGAAATTGTTGCCACAGCCAAAAATTCCTGGATTTTACACTTCAAGTAATTTTCCTCAAGATCTAACTTCTTTGTACCAAAGATCTGTACAGTTCTCACAAAATGAAATTTCCCAAACCATGCTAGTGGGAAGATGA 1983 0.3984 MQGFDEHNNGEFQSSVSLLLAALLYKTPHLTRHHRRSGNSGNLEQLLWQSFDHPCDTLMPGMKLGWDQETGLDRFLSSWKGSDDPGRGDYAIKIDRRGYPQSFQLEGSKVMVRTGSWNGLSFTGLANHILNPLINGEFVMNEKEVYYKFDLINNSVFSRYVMNPSGIGQRFNWVIQTSSWRVTNTGSGTSDTCSNYALCGANSICNISNNPVCECLRGYEPKNFKEWNVSDWNGGCTRRVSLDCGGGDGFKQYTGIKLPDTSSSWYNMTMDLEECKKTCLQNCSCAAYSNLDIRGEGSGCLLWFDRLLDMRQFPAGGQDLYVRVPAFELDSFRDEGRGSIGKKKLVGIAFGCAIFVTSIMILGLTLIAKKRKLRNSGKEDMGIATFDLSVIIKATDNFSTVNKLGEGGFGTVYKGTLEDGQELAVKKLSTKSVQGFEELKNEVLLIAKLQHRNLVKLIGCCIEGEEKLLIYEYMPNKSLDYFIFDFGLARIFWDDQVEANTNKVVGTYGYMPPEYAAYGQFSMKSDVFSFGVIVLEIVSGKKNRRFLDPEYNLNLLGYAWRLWMEGRPMELLDVCLNESCIQSEVIRCIQVGLLCVQQRAEDRPDMSTVVLMLNGEKLLPQPKIPGFYTSSNFPQDLTSLYQRSVQFSQNEISQTMLVGR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0955 660 SUPERFAMILY Protein kinase-like (PK-like) 381 647 IPR011009 -
Alju10g0955 660 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 39 603 - -
Alju10g0955 660 ProSiteProfiles Protein kinase domain profile. 398 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0955 660 Gene3D Hepatocyte Growth Factor 241 321 - -
Alju10g0955 660 Pfam Protein tyrosine and serine/threonine kinase 400 483 IPR001245 GO:0004672|GO:0006468
Alju10g0955 660 ProSitePatterns Protein kinases ATP-binding region signature. 404 427 IPR017441 GO:0005524
Alju10g0955 660 Pfam D-mannose binding lectin 41 80 IPR001480 -
Alju10g0955 660 ProSiteProfiles PAN/Apple domain profile. 244 325 IPR003609 -
Alju10g0955 660 CDD PAN_AP_plant 240 325 - -
Alju10g0955 660 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 243 324 - -
Alju10g0955 660 SUPERFAMILY alpha-D-mannose-specific plant lectins 40 85 IPR036426 -
Alju10g0955 660 Gene3D Phosphorylase Kinase; domain 1 364 473 - -
Alju10g0955 660 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 492 618 - -
Alju10g0955 660 Gene3D Transferase(Phosphotransferase) domain 1 480 614 - -
Alju10g0955 660 Pfam S-locus glycoprotein domain 113 223 IPR000858 GO:0048544
Alju10g0955 660 Pfam PAN-like domain 244 310 IPR003609 -
Alju10g0955 660 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 364 473 - -
Alju10g0955 660 SMART ntp_6 245 324 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0955 Alju-ChrAlju10 9060138 9063757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0955 345 631 Receptor kinase-like Gene Family AT4G23190 41.360 5.96e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g0955 S_locus_glycop 8.2e-24 No_clan