Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0953 ATGCAAGGTCGAGGAGATTACGTCATCAAAATTGACCGTAGAGGGTACCCACAAGCCGTTGAACTGAAAGGTTCAGAGTTGAAGGTTAGAGCTGGGTCATGGAATGGCTTCTCTTTCACAGGGTTTCCAAATCATAATACGGATCCTGTAGTAACTGCTGAGTTTGTGTTGAATGAAACAGAGGTATATTACAAATTTGAGCTGATAAATAGTTCAATTTTCTCTAGATATGCAATAACCCCATCAGGGGTTGGTCAGCGTTTTGATTGGGTAATTAAAACAAACAGTTGGCTGGTATTGAACACTGGACCTCCAGATCAGTGTGACAATTATGCCTTGTGTGGTGCAAATTCTATCTGCAACATTAGTAACAATCCTGTTTATCATTTTGGGAATGAAGGACATGGGAGCATCAGCAAGAAGAAGCTAGCAGGAATTGTGGTTGGCTGTGTAGTCACTATCTTCATAATAATTCTTGGATTGATTTCATTCAAAAGGAAAAGGAAACTTAAGAAATCAGAGAAGGAAGTCATGGATCTACCTACATTTGACTTGTCAGTCATAACTAAAGCTACTGATAACTTTTCAATTATTAACAAGTTGGGAGAAGGTGGCTTTGGATCAGTATATAAGGGCACCCTAGAAGATGGGCAAGAGTTAGCTGTGAAAAGTGGATATATGCCTCCTGAGTATGCTGTGCATGGACAATTTTCAATGAAATCCGATATCTTTAGCTTTGGTGTAATAGTGCTTGAGATTGTCAGTGGAAAAAAGAATAGGGGATTTACAGATCCAGAATACAACCTTAATCTTCTTGGACATGCATGGAGATTGTGGATCCAAGGAAGACCAATGGAACTACTAGATGAATGTTTAAAGGAAAGTTGCATCGAATCCGAAGTCATAAGATGCATACAGCTAGGACTCTTATGTGTTCAACAAAGAGCTGAAGATCGACCTAATATGTCAGTTGTAGTTCTTATGTTAAATGGTGAGAAATTATTGCCACAGCCAAAAGTTCCTGCCTTTTATACTGCAAGTGATGTTCCTCCCAATCCAACTTGTTTAGATCAAAGATGTATACAGTTCTCACAAAATGAAATTTCTCAAACCACTCTAGAGGGAAGATGA 1131 0.3882 MQGRGDYVIKIDRRGYPQAVELKGSELKVRAGSWNGFSFTGFPNHNTDPVVTAEFVLNETEVYYKFELINSSIFSRYAITPSGVGQRFDWVIKTNSWLVLNTGPPDQCDNYALCGANSICNISNNPVYHFGNEGHGSISKKKLAGIVVGCVVTIFIIILGLISFKRKRKLKKSEKEVMDLPTFDLSVITKATDNFSIINKLGEGGFGSVYKGTLEDGQELAVKSGYMPPEYAVHGQFSMKSDIFSFGVIVLEIVSGKKNRGFTDPEYNLNLLGHAWRLWIQGRPMELLDECLKESCIESEVIRCIQLGLLCVQQRAEDRPNMSVVVLMLNGEKLLPQPKVPAFYTASDVPPNPTCLDQRCIQFSQNEISQTTLEGR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0953 376 SUPERFAMILY Protein kinase-like (PK-like) 225 356 IPR011009 -
Alju10g0953 376 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 120 223 - -
Alju10g0953 376 ProSitePatterns Protein kinases ATP-binding region signature. 201 223 IPR017441 GO:0005524
Alju10g0953 376 CDD TM_EGFR-like 143 172 - -
Alju10g0953 376 SUPERFAMILY Protein kinase-like (PK-like) 174 223 IPR011009 -
Alju10g0953 376 Pfam S-locus glycoprotein domain 30 126 IPR000858 GO:0048544
Alju10g0953 376 Gene3D Transferase(Phosphotransferase) domain 1 182 336 - -
Alju10g0953 376 Pfam Protein tyrosine and serine/threonine kinase 222 326 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0953 Alju-ChrAlju10 9011138 9014867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0953 224 358 Receptor kinase-like Gene Family AT4G23140 50.000 1.36e-40 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g0953 PK_Tyr_Ser-Thr 3.6e-07 CL0016