Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju10g0934 | ATGGACACACTCTGTTTCATGAACATCGTTGTTTATGTTCTTCTTGTCGCTGGTTTCAAAGCTTCCATGGCAGTTAAGGAAGAACGTGGGAGCAAGAAGAAGCTGACAATAATAATTGTCTCAACCTTGGGTGCAATTTCTGTGGTGCTTTTACTAGGCTTTTGTTTTTGTATCTACCAAGACCGGAGGAAGAGGAAAATGACTGATAAACCACATAACAATGAAGAAGATCAAAACAAGGGAGAAAGTGAGGATGATCTGGATCTCCCATTGATTGACTTTTCAACAATAGCTATTGCCACCAATAACTTCTCATTAGAGAACAAGATAGGAGAAGGAGGTTTTGGACCTGTATATAAGGGAAAATTAGTCCATGGGCAAGAGATTGCTGTTAAGAGGCTTTCAGGAAGCTCAAGGCAAGGAATAACTGAGTTTAAGAATGAAGTAAAACTGATAGCCAAACTCCAGCACCGTAATCTTGTCAAGCTTCTTGGTTGTTGCACCCAAGGAGATGACAAAATCCTGGTCTATGAGTACATGCCTAATGGAAGCTTGGACTGTTTCATTTTTGATGATGCAAAAGGCAAAGAGCTAGATTGGCCTAAACGATTCCATATCATTTGTGGAATTGCTAGGGGTCTTGTCTATCTTCATCAAGATTCTAGATTAAGGATTATTCACCGAGATCTCAAAGCAAGTAACGTCTTACTTGATGATAAGTTGAATCCGAAAATATCAGATTTCGGTATTGCTAGAATCTTTGGAGGGGACCAAATAGAAGGAAACACAAAGCGAGTAGTTGGCACTTATGGATATATGGCACCTGAATATGCCATAGATGGCTTATTTTCCGTGAAGTCGGATATCTTTAGTTTCGGTATATTACTATTGGAGATTATAAGTGGAAAGAGAAGTAGAGGGTTCTATCATCCAAACCACTCCCTCAACCTAATTGGTCATGCTTGGAATCTATGGAAAGAAGGCAATCCAATGGAACTAATAGACTCAAACTTAGAGGAAACATGCAATTTATCAAAAGTACTACGTTGTATTCATGTTGGCCTCTTGTGTGTCCAACATTACCCAGAGGATAGGCCTACCATGTCCTCTGTGGTTCTAATGTTGGGAAGTGAAACTGAATTGCCTCAACCTAAAGCACCTGGTTTCTATACCAATAAGGATTTCACTGAAACAAACTCCAACACAAGTCTAATGGAAATTAACTCTACCAATGAAGTAACTATTACCTTATTAGAAGCTCGATGA | 1266 | 0.3926 | MDTLCFMNIVVYVLLVAGFKASMAVKEERGSKKKLTIIIVSTLGAISVVLLLGFCFCIYQDRRKRKMTDKPHNNEEDQNKGESEDDLDLPLIDFSTIAIATNNFSLENKIGEGGFGPVYKGKLVHGQEIAVKRLSGSSRQGITEFKNEVKLIAKLQHRNLVKLLGCCTQGDDKILVYEYMPNGSLDCFIFDDAKGKELDWPKRFHIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGIARIFGGDQIEGNTKRVVGTYGYMAPEYAIDGLFSVKSDIFSFGILLLEIISGKRSRGFYHPNHSLNLIGHAWNLWKEGNPMELIDSNLEETCNLSKVLRCIHVGLLCVQHYPEDRPTMSSVVLMLGSETELPQPKAPGFYTNKDFTETNSNTSLMEINSTNEVTITLLEAR | 421 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju10g0934 | 421 | SMART | serkin_6 | 104 | 375 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju10g0934 | 421 | Gene3D | Phosphorylase Kinase; domain 1 | 63 | 179 | - | - | |
| Alju10g0934 | 421 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 26 | 421 | - | - | |
| Alju10g0934 | 421 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 180 | 383 | - | - | |
| Alju10g0934 | 421 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 225 | 237 | IPR008271 | GO:0004672|GO:0006468 | |
| Alju10g0934 | 421 | ProSiteProfiles | Protein kinase domain profile. | 104 | 381 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju10g0934 | 421 | SUPERFAMILY | Protein kinase-like (PK-like) | 89 | 375 | IPR011009 | - | |
| Alju10g0934 | 421 | MobiDBLite | consensus disorder prediction | 67 | 86 | - | - | |
| Alju10g0934 | 421 | Pfam | Domain of unknown function (DUF3403) | 378 | 421 | IPR021820 | GO:0004674 | |
| Alju10g0934 | 421 | Pfam | Protein tyrosine and serine/threonine kinase | 105 | 373 | IPR001245 | GO:0004672|GO:0006468 | |
| Alju10g0934 | 421 | CDD | STKc_IRAK | 110 | 375 | - | - | |
| Alju10g0934 | 421 | Gene3D | Transferase(Phosphotransferase) domain 1 | 180 | 386 | - | - | |
| Alju10g0934 | 421 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 67 | 179 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju10g0934 | Alju-ChrAlju10 | 8726089 | 8729364 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju10g0934 | 35 | 389 | Receptor kinase-like Gene Family | AT4G23230 | 54.775 | 2.61e-135 | 400 |
Transcription factors information