Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0932 ATGGCGGATGACCAATTTCATCAAGCAACTGCAAATTGGTGGGACTCGTCTTCTTCAAGAACAGCTCCTTCCCAACTGTCATCTTCCTCAAACCTCACCAGCTTCCCCAACTTCACTTGGAACACAGATCATCATGACGACCTCAAGCCAACCTCTTCCATCTCCGATTCTCCCACCTCCACTCACCCAAACTTGCACATGATCATGGCCTGGAACAATAATAACCAGCCCTCCCATCATCATAGTCTCCTCAGAGAGGAGAAGGGGGTGTCCGATGGCCGATTCAGATCCATGTTTCAAGAGAACAATATGAGTTCAGGAGGCAGTAATTTTCATCATCATCAGCAGCAGCATCAGCAAGTTGAGTGGAGAGAGAAGCTTTTGTTTTCTACAGAATCATCTTCAACATCTGGGGATAGTATAGTGACCACAAGCCAAGGCTTAGCTAATTCTAGTTTCCATATGGATTCTAATAATTCCTATTCTGCTGCAAATCCTTCAATATTATTACAGGGATTATTAGCACCTGAAGCTTCTTCTTCTACTTCCTCCTTCGACAATAATAATCATCATAATAGTTCCTGCTTCAATAGTTTTCCCTATGCCTCGGCCTTGAGCTCTAGTAGTGATCAGTTAATGGCTTCTCAGTTTCTTAGGGCTTCGCCGCCCAAACAAACACCACATCACGGCGGCGTCGGAGGTAACAGGCAGTTGCAGTTTACCAACAACACCACCTTCTGGAACGCTTCGGAAGCTCATCATCATCCTCATGCCGCCATTAAAGAGCCTCGACCTTCTTGCTTCTTCCCTAATTCCTTGCAGCCTCCTTTTCACTCGCCCAATTTTGATGCACAATCAAAGAATATTTGTGGAGGAAGAGAAACGAGTAGTGTGGGGAAGAAAAGTGGTGGAGAGACAGCACCAAAAAGGGCTAGAAACGAAACCTCATCAACTTTGCCACCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACCGTGTTACTGCTCTTCAACAATTGGTTTCGCCTTTTGGGAAGACTGATACTGCCTCAGTGCTGTCTGAAGCCATTGAATATATCAAATTCCTCCACGAACAAGTCTCTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCCTTACAGCACCAACAGAGTTCTGGTAAATGTAAGGAAAGTGAAGCCCTAAAACAAGACCTGCGAAGCCGAGGGTTGTGTTTGGTGCCTGTTTCAAGTACTTTCCCAGTCACTCACGAAACCACTGTTGATTTTTGGATGCCAACTTTTGGAGCCACTTTCAGATGA 1302 0.4516 MADDQFHQATANWWDSSSSRTAPSQLSSSSNLTSFPNFTWNTDHHDDLKPTSSISDSPTSTHPNLHMIMAWNNNNQPSHHHSLLREEKGVSDGRFRSMFQENNMSSGGSNFHHHQQQHQQVEWREKLLFSTESSSTSGDSIVTTSQGLANSSFHMDSNNSYSAANPSILLQGLLAPEASSSTSSFDNNNHHNSSCFNSFPYASALSSSSDQLMASQFLRASPPKQTPHHGGVGGNRQLQFTNNTTFWNASEAHHHPHAAIKEPRPSCFFPNSLQPPFHSPNFDAQSKNICGGRETSSVGKKSGGETAPKRARNETSSTLPPFKVRKEKMGDRVTALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYMKSGAPLQHQQSSGKCKESEALKQDLRSRGLCLVPVSSTFPVTHETTVDFWMPTFGATFR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0932 433 MobiDBLite consensus disorder prediction 1 33 - -
Alju10g0932 433 Gene3D - 323 387 IPR036638 GO:0046983
Alju10g0932 433 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 30 414 - -
Alju10g0932 433 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 323 378 IPR036638 GO:0046983
Alju10g0932 433 CDD bHLH_AtbHLH_like 319 370 IPR045239 -
Alju10g0932 433 MobiDBLite consensus disorder prediction 287 302 - -
Alju10g0932 433 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 313 362 IPR011598 GO:0046983
Alju10g0932 433 MobiDBLite consensus disorder prediction 9 33 - -
Alju10g0932 433 FunFam Transcription factor bHLH123 family 323 385 - -
Alju10g0932 433 MobiDBLite consensus disorder prediction 287 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0932 Alju-ChrAlju10 8698404 8701419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0932 238 433 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 63.000 1.11e-70 226