Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0931 ATGCGTGAATGGTGGAGTGTGATGCAAACTGCGTGGTCGGTGAATCTCAATATCTTCTCTGACTTCAGTGCCACAATGCTGGCCATTACTATGCACCTTGCAAGTCAAACTCATAGGGCATTAAAAAAAAAAAAAAATTGTGCAGAAGAGGAATCGAACCGGAAAGAAACCATGGATCTTCTCTGCGACGCATACGGCAATGTGTCTGACGATGATCAAGATCAACCGAAACGCCAGAAGCTCGCGCCATCTTCTTCAAACCACTGCTCGCAGCTTCAAACGCAATCTTCGCTTCCTGGCAGATATATTTCCAAGCGACAAAGGGCTCTTTTAGGCGTTAATCCCACTGTTCCCAACCCAGCTCCAGCTCTGGTCTCTCCTTCTGTCACTTTATCCGGAAGCATCTTGGATACTGATCTACCTCCTAGCATTTTATCATTGTTGAGAAATAAAGCTAGAGGTCAACAAAATCTGAACCTGATACCTGAAAGGCTATCTGTGGCACTATCTGGCCATACAAAAGCTGTCAGTGCTATACAATGGTCTCCCACTCATGCTCATCTCCTTGCATCTGCCGGGATGGACCATTTAGTTTACATTTGGAATGTATGGAGTAGAGATCAAAAGAAAGCATGTGTAATAAACTTCCACAATGCAGCAGTGAAAGATGTGAAATGGTCTCAGCAAGGGCACTCTATACTTTCTTGTGGATATGATTGCAAATCAAGGTTGATTGATGTAGAAAAGGGGTTTGAGACTCAGGTTTTTAGTGAGGATCAAATTGTTGGAGTTATAAAATTTCATCCAGACAACTCAAACCTCTTTCTTTCTGGTGGTTCAAAAGGCCATATTAGATTATGGGATATCAGGACTGGCAAAGTAGTCCATAGCTTTAATCGCAATTTAGGTCCAATTTTGGATGTTGAGTTTACAGTCAGTGGGAAGCAGTTCATTTCTTCTAGTGATGTATCTGGGAGTAATGTCAGTGAGAACTCAATTATTGTTTGGGATGTGTCTAGACAGGTTCCGCTGTCTAGTCAGGTTTATGTTGAAGCTTACACCTGTCCGTGCATAAGGCGCCACCCATATGAGTCTACTTTCGTTGCCCAGTCAAATGGGAATTACATTGCAATTTTTACATCCAACCCCCCTTTCAAGCTAAACAAATACAAGAGATATGAAAGCCACGGCGTCTCTGGGTTCCCCATAAAGTGCAATTTCAGTTTGGATGGGAAGAGGCTTGCTTCTGGTTCTTCAGATGGTTGTATTTATCTTTACGATTATCAGTCATCTAACGTTGTTAAGAAAATCAAGACGTCTGACCAAGCATGCATAGATGTTGCTTTCCATCCTGTTATACCTAATGCTATTGCTTCATGCTCCTGGGATGGAAGCATCTCAGTATTTGAATAG 1413 0.4239 MREWWSVMQTAWSVNLNIFSDFSATMLAITMHLASQTHRALKKKKNCAEEESNRKETMDLLCDAYGNVSDDDQDQPKRQKLAPSSSNHCSQLQTQSSLPGRYISKRQRALLGVNPTVPNPAPALVSPSVTLSGSILDTDLPPSILSLLRNKARGQQNLNLIPERLSVALSGHTKAVSAIQWSPTHAHLLASAGMDHLVYIWNVWSRDQKKACVINFHNAAVKDVKWSQQGHSILSCGYDCKSRLIDVEKGFETQVFSEDQIVGVIKFHPDNSNLFLSGGSKGHIRLWDIRTGKVVHSFNRNLGPILDVEFTVSGKQFISSSDVSGSNVSENSIIVWDVSRQVPLSSQVYVEAYTCPCIRRHPYESTFVAQSNGNYIAIFTSNPPFKLNKYKRYESHGVSGFPIKCNFSLDGKRLASGSSDGCIYLYDYQSSNVVKKIKTSDQACIDVAFHPVIPNAIASCSWDGSISVFE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0931 470 Gene3D - 148 470 IPR015943 GO:0005515
Alju10g0931 470 ProSiteProfiles Trp-Asp (WD) repeats profile. 169 211 IPR001680 GO:0005515
Alju10g0931 470 MobiDBLite consensus disorder prediction 66 97 - -
Alju10g0931 470 ProSitePatterns Trp-Asp (WD) repeats signature. 189 203 IPR019775 -
Alju10g0931 470 ProSiteProfiles Trp-Asp (WD) repeats profile. 255 297 IPR001680 GO:0005515
Alju10g0931 470 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 169 203 - -
Alju10g0931 470 Pfam WD domain, G-beta repeat 169 202 IPR001680 GO:0005515
Alju10g0931 470 Pfam WD domain, G-beta repeat 393 427 IPR001680 GO:0005515
Alju10g0931 470 Pfam WD domain, G-beta repeat 265 288 IPR001680 GO:0005515
Alju10g0931 470 Coils Coil 31 51 - -
Alju10g0931 470 MobiDBLite consensus disorder prediction 79 97 - -
Alju10g0931 470 SUPERFAMILY WD40 repeat-like 156 469 IPR036322 GO:0005515
Alju10g0931 470 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 255 293 - -
Alju10g0931 470 SMART WD40_4 207 246 IPR001680 GO:0005515
Alju10g0931 470 SMART WD40_4 249 288 IPR001680 GO:0005515
Alju10g0931 470 SMART WD40_4 162 202 IPR001680 GO:0005515
Alju10g0931 470 SMART WD40_4 430 470 IPR001680 GO:0005515
Alju10g0931 470 SMART WD40_4 388 427 IPR001680 GO:0005515
Alju10g0931 470 SMART WD40_4 291 337 IPR001680 GO:0005515
Alju10g0931 470 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 42 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0931 Alju-ChrAlju10 8670812 8676522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0931 172 417 Miscellaneous Gene Families AT5G08390 19.600 4.50e-07 50.4