Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0912 ATGCGTGCCTCCAACGCTAGAAATCTTTGTACACTGAGTGGTCTTCTCCGTTCTTCAACCGTGAAACTCAAGACTTCTAAGCCCCAATCCTATTCTCTAGCTTCATCCATTTATGAAGATGATTTTTCGGACCTCGATGGTGATTCTGACTCAACCCGCAACTCTCTCGAGTTTGAGCGACCCTCTGATTCAGAGAAATTGCCTGACCTGGTATCTAAGCAGATTTCTTCTATGTTGTCTGATAAAAAGAAAATTCCAAGAGGTCGAGTTCGAAAGTTTGCAAAATTTGAGTCTTCTACTCTAGATTCATCCATTTTGAAAAAAGATTTACTCGATGGCGAGCCTAAGCTTACAAGCTTCAAGGACCTTGACTACGCAACACTCTCTTGTTCAGAATCTGATGGAGCTGAGAAAAAACTTTCAAGAGGTCAAATTCACTACTCTTCAAAAATGAAATCCTTTCCTCAAGCATTGTCCGTTTTGGAAGATGATTTTTCAGAACTTGACAGCGAACACAGTCCTTCTAGCCGTGAAGACTTTGACTTTGTTCAACCCTCTGTTTCAGAGAATTCACCTAATCTCTACACTGAGCAGATTAGTAATTTACTGTGTGATGATCAGTTGGTCAAGAGATCAGGAGATGATTTAGAAAAATTGGAAATTGCACTAGCTGTACCATGGAGACCTGGCCCGTTTGGTGGGAGTACATCACAGCGACAGAAAGAGAAGACTCGTGACAGAAAGAAAAAGTGGATTTTTAAACACACGCAGGAAAACCGCTTTGAAAGGGTAGTTAAATTCTGTGCAGATAAACTGGGTACAAAGGCTACTGTGGAAGTGTTAGGTAAATTGGGAAGAAAAACAGGCGTGAAAGAATACAATGCATTGATAGAAGTATGCATAAATAATGCCAGGAAAACCAATGATGAAGAAGTGGCAATTGAAGAAATGAGCAAGGCTTTTCGCCTTTTTAGAGTAATGAGAGAACAAGGTTATGAACTACAAGAGAAAACATACAGCCCTCTTCTTGTGTATTTAATTGACATGGGTATGGTTGAAGAATTTCAATTATTCAGTGAGGTAATCAAAGATGAGAATCCTAGTTCAGTTTCAAGATTGGGTTACTACGAAATGATGTTATGGCTTAGAGTTGATAACAAAGAAAAGATTCAGGATCTTTGTAACTCTATTGCAGTCAATGATGGTATAGACTCTTCTGGTCTAGGAGAAAGTTATTTACTGGCATTTTGTGAAAGTGATTGGAAGGAGGGGCTTTTACAGCTGTTGGAAATTTTAGACATTACAAAGCTTTCATCTACAGAATCTGTAGCAAGTATTTTTAGATCATTGGGAAGGCTATGCTTGGACTCAGATGCAGAAAAGTTCCTATCAGTTTTCAAAATTTTTGATAATGATGAAGCAAATAATGTTACAAACTTCATTGCCAGTTATGTTGTTAGCCTACCAAATTTAGCGGTTGAGGATGTCATGTCGAAGTTCAAGGATTTGCACCAAAAACTGAAAGTTTCACCTTCATCCTCATCATATGAGAAACTCATTATATATGCCTGTGACTTACTCGAGGTGCATTTAGCTCTCAAGATTGTTTGTGCAATGTGTGAAGCAGGCTTTACCTTATCTACTGAGGTGTTAAACTCCATATTACGAAGTGTTGAAGAAACATGTGAATATAATTTGGTCCACTGGATCTATTCCATAATATCTCACTACAGTTTGAAGGCAAATTGTGAAACATTCAGGTATATGATATGCTTGTGCACCAGGATGAAAGATTTTGCAAGTGCAGATAAGATGCTTGATGATTTGGAAGAAATGAATTTGAAGCCTACGTCTAGCATGTACAATGCTATTATGGCTGGATATTTTAGAGAGAAAAACGTTAATGATGCTTTGAGGGTCCTTGAGCGCATGAAAGATACCAATATCAAGCCTGATTCAAGTACTTACAACAATTTGATTGGCAACTCTAAAACTGAGGAGGATATAACCAAGTATTATGAAGAAATGAAGCAGTCTAACTGCCAACCTACAAAGCAGACTTTTGTGGCCCTTATAACTGCATATGCAGCCTGTGGACAGTTGGAGAATGCAAAACAGGTGGTCTTAGATCCAGCCATTCCTGCAAAGAGCTTAAATGAAATCAAATGTGCTCTTCTCTCAACTCTTGCATCACATGGGCAATTGTCAGATTCTTTTCGTATTTACGAGGAAATCAAGGAATCTGGAAACAATCTGGAGCCAAAAGCTGTTATAAGTCTTATTGAGGGACACATCAAATCTGATGAGGAGTTGGATAGATTGTTTCTGCTACTTAAAGAATTGACTGATCCTGACTATTGGATAGATGGTTGCTTTAGAATTATTATGTTTTGTGTAGAGAACCAGCATTTAAGTTCTGCTGTTGACTTGATGAAGCAACTCAATGATAAAATTCAGGATGACGAACTACTAATCGAAGTTCTTTTGGATCAGGTGTTTTCTACAATTGCATCATCAGAGTCCACACATTTGAAGTTTGGCCTTGACCTTTATTGGCTGATCAGGAAAGTGCTTCACATTGTGCCTTCACGGCAATGTCTGGATTTTCTTCTAACTGCTTGTGCCAATGCCAAAGATTTGCAGAACATTCGTAAAATTTGGAAAGAATACCAGCTTGCTGGATACCCTTTTAATGTTTTAAGTTACGTGAGGATGTATAGAGCTCTTTTGGTTGCAGGAGATTATAAATCTGCCCATCTTATGCTCAAGAAAATTCCAAGAGATGATCCCGATGTTCATCGCGTCGTCAAAGAATGTCGAAAAACATACAATGATCGTTCCTGGGAGAAACTTGCAGAGCAGATGGCTGAGAAAGAATAG 2880 0.3854 MRASNARNLCTLSGLLRSSTVKLKTSKPQSYSLASSIYEDDFSDLDGDSDSTRNSLEFERPSDSEKLPDLVSKQISSMLSDKKKIPRGRVRKFAKFESSTLDSSILKKDLLDGEPKLTSFKDLDYATLSCSESDGAEKKLSRGQIHYSSKMKSFPQALSVLEDDFSELDSEHSPSSREDFDFVQPSVSENSPNLYTEQISNLLCDDQLVKRSGDDLEKLEIALAVPWRPGPFGGSTSQRQKEKTRDRKKKWIFKHTQENRFERVVKFCADKLGTKATVEVLGKLGRKTGVKEYNALIEVCINNARKTNDEEVAIEEMSKAFRLFRVMREQGYELQEKTYSPLLVYLIDMGMVEEFQLFSEVIKDENPSSVSRLGYYEMMLWLRVDNKEKIQDLCNSIAVNDGIDSSGLGESYLLAFCESDWKEGLLQLLEILDITKLSSTESVASIFRSLGRLCLDSDAEKFLSVFKIFDNDEANNVTNFIASYVVSLPNLAVEDVMSKFKDLHQKLKVSPSSSSYEKLIIYACDLLEVHLALKIVCAMCEAGFTLSTEVLNSILRSVEETCEYNLVHWIYSIISHYSLKANCETFRYMICLCTRMKDFASADKMLDDLEEMNLKPTSSMYNAIMAGYFREKNVNDALRVLERMKDTNIKPDSSTYNNLIGNSKTEEDITKYYEEMKQSNCQPTKQTFVALITAYAACGQLENAKQVVLDPAIPAKSLNEIKCALLSTLASHGQLSDSFRIYEEIKESGNNLEPKAVISLIEGHIKSDEELDRLFLLLKELTDPDYWIDGCFRIIMFCVENQHLSSAVDLMKQLNDKIQDDELLIEVLLDQVFSTIASSESTHLKFGLDLYWLIRKVLHIVPSRQCLDFLLTACANAKDLQNIRKIWKEYQLAGYPFNVLSYVRMYRALLVAGDYKSAHLMLKKIPRDDPDVHRVVKECRKTYNDRSWEKLAEQMAEKE 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0912 959 Coils Coil 811 831 - -
Alju10g0912 959 Gene3D Tetratricopeptide repeat domain 257 380 IPR011990 GO:0005515
Alju10g0912 959 PANTHER OS02G0132600 PROTEIN 144 951 - -
Alju10g0912 959 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 617 651 IPR002885 -
Alju10g0912 959 MobiDBLite consensus disorder prediction 47 66 - -
Alju10g0912 959 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 582 616 IPR002885 -
Alju10g0912 959 MobiDBLite consensus disorder prediction 40 66 - -
Alju10g0912 959 Pfam PPR repeat family 616 660 IPR002885 -
Alju10g0912 959 Gene3D Tetratricopeptide repeat domain 665 787 IPR011990 GO:0005515
Alju10g0912 959 Gene3D Tetratricopeptide repeat domain 793 959 IPR011990 GO:0005515
Alju10g0912 959 Gene3D Tetratricopeptide repeat domain 551 664 IPR011990 GO:0005515
Alju10g0912 959 NCBIfam pentatricopeptide repeat 620 653 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0912 Alju-ChrAlju10 8458634 8469563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0912 500 777 Glycosyltransferase AT1G05670 21.549 4.63e-11 65.1